ENST00000528514.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000528514.1

Source

Gencode19

Same with

lnc-ZNF705D-2:1,NONHSAT125126

Classification

intergenic

Length

1361 nt

Genomic location

chr8+:12051976..12053789

Exon number

2

Exons

12051976..12052946,12053400..12053789

Genome context

Sequence
000001 AGGAGGCGGG ACCCAGAGCA GAGCCCAGGA GACAGGTCTT AGGGCGGGGC TAAGGCCAGG CCCAGAGAAG GGCTCAGGAG 000080
000081 GCGGGGCAGG GGCGGGGCGT TGACTATGTC GTAGAACATG GCCAGGCGGT GCGCGGACTC TGGGAGGCGA AGCTTAGGAC 000160
000161 GGGCCCACTT GGGGAGGGGC CCAGTGCCCG GGAGGCGGGG CCGAGTCCGG GCTGGGCTGC GCTCAGGAGG CGGGCCCTGG 000240
000241 GAGGCGGAGC TTAGGGAGGG GCCGGTGTTG GGAGGGACCC AGGGACTGGG AGGCCGGTTG GGGCTGGGCT CAGGGGCCGA 000320
000321 GACCTAGCTG GGCTTGGGGC GGGGCCGAGA CGGAGCGAGG GGTCCAGGGT GTGGGAAACG GGGAGGGGTT TGAGGAGGGG 000400
000401 ATCGGAATGT GGCTCAAGTT CGGGAGGCGT TACCTGCGGA GGGTTTGAGG CAGGCCCAGG AGCGAGCCCA TGGTCTTCCG 000480
000481 ACGCGGGGCC AGGGGCGGGG CCCAGGATCC GGAGCTTCGT GCGGGGCCGA GTCCAGGTTT GGGGCCCGGG AGGCGGGGCC 000560
000561 AGTTAGGGCG AGGGTCCCTG GGATCGTCGG GTCAGGCCTT GGGCTAACGT AGGCACTCTC GCAGTTCCTC CGCCTTCAGG 000640
000641 AAGGTCTTTT CAGCAGGGGC CTTACGGGTG CATGCTTCGG TCCTGGAGGC CTTATCCTAG CCTCCTCTCC ATCAGCGCCA 000720
000721 CCCGTCTGGG GCCCGAAAGG AGGGAGCTTT CCCTCTGTCC CCCAGCCTTT GGACTGTCAC TAAACAAGCC ATTCGTTCAT 000800
000801 CAAATACTTT TTAAGCGCCT ACCATGTGCC TGACAAGGGA GATGTAACGG TGAGAAAAAC TAGGTGTGGT CCAGGCCCTT 000880
000881 CAGGGGCTCA GGTGCTCGTG GAAGAAGTGG ACATTGAAGT ACTTATCACA CAAATGAGGA TAAAAGTACG ATAACGATAT 000960
000961 CTACCACGAA GCTGTTGTTC CCCACCAGAA CCAAATGAGC GCAAGATCTG ACAAAGAAAA AAAAAGGTTC ATCTTTTATT 001040
001041 CCTCCAAACA CTTTCATTTA AATCAAGAGG ATGGGATGTG GTTATTGCTG TGTTTTTAGA CAGAATCAAC GGTTTCTGGG 001120
001121 TCTGAGATGT TGCATACACC TTCTCAGTCC CTGTATCCTG AGATGGAGTC ACCTGAGAAT CCACAGCAAG TCCTAACCAG 001200
001201 GGATGGGTCT GGGTGATTAA GGAAGGTTGG CTTCAGAACT GGGCCAGGGG CACTGCTTTG CTTTTGCTGT TTTGATCAGC 001280
001281 TCTCTGCCTG AAGGAGACAA GAAAAACCAA CGGGAACAGG TTAGTTATAC TGATAAATCC TGGGCTTATT TTATTAACTC 001360
001361 A
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Predicted Small Protein

Name ENST00000528514.1_smProtein_671:832
Length 54
Molecular weight 6065.1921
Aromaticity 0.0943396226415
Instability index 72.1603773585
Isoelectric point 10.8516235352
Runs 7
Runs residual 0.0281868384722
Runs probability 0.038143185202
Amino acid sequence MLRSWRPYPSLLSISATRLGPERRELSLCPPAFGLSLNKPFVHQILFKRLPCA
Secondary structure LLLLLLLLLLLLEEELLLLLLLLEEELLLLLLLLLLLLLHHHHHHHHHHLLLL
PRMN -
PiMo -