ENST00000528514.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000528514.1 |
Source |
Gencode19 |
Same with |
lnc-ZNF705D-2:1,NONHSAT125126 |
Classification |
intergenic |
Length |
1361 nt |
Genomic location |
chr8+:12051976..12053789 |
Exon number |
2 |
Exons |
12051976..12052946,12053400..12053789 |
Genome context |
|
Sequence |
000001 AGGAGGCGGG ACCCAGAGCA GAGCCCAGGA GACAGGTCTT AGGGCGGGGC TAAGGCCAGG CCCAGAGAAG GGCTCAGGAG 000080
000081 GCGGGGCAGG GGCGGGGCGT TGACTATGTC GTAGAACATG GCCAGGCGGT GCGCGGACTC TGGGAGGCGA AGCTTAGGAC 000160 000161 GGGCCCACTT GGGGAGGGGC CCAGTGCCCG GGAGGCGGGG CCGAGTCCGG GCTGGGCTGC GCTCAGGAGG CGGGCCCTGG 000240 000241 GAGGCGGAGC TTAGGGAGGG GCCGGTGTTG GGAGGGACCC AGGGACTGGG AGGCCGGTTG GGGCTGGGCT CAGGGGCCGA 000320 000321 GACCTAGCTG GGCTTGGGGC GGGGCCGAGA CGGAGCGAGG GGTCCAGGGT GTGGGAAACG GGGAGGGGTT TGAGGAGGGG 000400 000401 ATCGGAATGT GGCTCAAGTT CGGGAGGCGT TACCTGCGGA GGGTTTGAGG CAGGCCCAGG AGCGAGCCCA TGGTCTTCCG 000480 000481 ACGCGGGGCC AGGGGCGGGG CCCAGGATCC GGAGCTTCGT GCGGGGCCGA GTCCAGGTTT GGGGCCCGGG AGGCGGGGCC 000560 000561 AGTTAGGGCG AGGGTCCCTG GGATCGTCGG GTCAGGCCTT GGGCTAACGT AGGCACTCTC GCAGTTCCTC CGCCTTCAGG 000640 000641 AAGGTCTTTT CAGCAGGGGC CTTACGGGTG CATGCTTCGG TCCTGGAGGC CTTATCCTAG CCTCCTCTCC ATCAGCGCCA 000720 000721 CCCGTCTGGG GCCCGAAAGG AGGGAGCTTT CCCTCTGTCC CCCAGCCTTT GGACTGTCAC TAAACAAGCC ATTCGTTCAT 000800 000801 CAAATACTTT TTAAGCGCCT ACCATGTGCC TGACAAGGGA GATGTAACGG TGAGAAAAAC TAGGTGTGGT CCAGGCCCTT 000880 000881 CAGGGGCTCA GGTGCTCGTG GAAGAAGTGG ACATTGAAGT ACTTATCACA CAAATGAGGA TAAAAGTACG ATAACGATAT 000960 000961 CTACCACGAA GCTGTTGTTC CCCACCAGAA CCAAATGAGC GCAAGATCTG ACAAAGAAAA AAAAAGGTTC ATCTTTTATT 001040 001041 CCTCCAAACA CTTTCATTTA AATCAAGAGG ATGGGATGTG GTTATTGCTG TGTTTTTAGA CAGAATCAAC GGTTTCTGGG 001120 001121 TCTGAGATGT TGCATACACC TTCTCAGTCC CTGTATCCTG AGATGGAGTC ACCTGAGAAT CCACAGCAAG TCCTAACCAG 001200 001201 GGATGGGTCT GGGTGATTAA GGAAGGTTGG CTTCAGAACT GGGCCAGGGG CACTGCTTTG CTTTTGCTGT TTTGATCAGC 001280 001281 TCTCTGCCTG AAGGAGACAA GAAAAACCAA CGGGAACAGG TTAGTTATAC TGATAAATCC TGGGCTTATT TTATTAACTC 001360 001361 A |
Predicted Small Protein
Name | ENST00000528514.1_smProtein_671:832 |
Length | 54 |
Molecular weight | 6065.1921 |
Aromaticity | 0.0943396226415 |
Instability index | 72.1603773585 |
Isoelectric point | 10.8516235352 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.038143185202 |
Amino acid sequence | MLRSWRPYPSLLSISATRLGPERRELSLCPPAFGLSLNKPFVHQILFKRLPCA |
Secondary structure | LLLLLLLLLLLLEEELLLLLLLLEEELLLLLLLLLLLLLHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |