ENST00000527725.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000527725.1 |
Source |
Gencode19 |
Same with |
lnc-RPL27A-2:3,NONHSAT017884 |
Classification |
intronic(AS) |
Length |
450 nt |
Genomic location |
chr11+:8806948..8831778 |
Exon number |
3 |
Exons |
8806948..8807009,8808601..8808833,8831624..8831778 |
Genome context |
|
Sequence |
000001 CCCCTCACTC TTCCTGCCTC TAACCGAAAA GGAGGATACA GACCAAGGAG CACTTCATGA AGGAAAACCA AGGCCCAAGT 000080
000081 CATACAGCTA GTAAAAGGAG GAGCCACAAT TCAAACCAGG ACTGATTTCA AAATTCGCAT TCCTTCCACT ATGCCATGGA 000160 000161 AAGTACAGTA GGGTGTTTTT ATGTCAACTG CAGCCAGACA CATCAATTTT CTCCTCTGAG AGGACAGGAT ATAAATCTGA 000240 000241 AGAAACAATG TATATGAAAA TATGCTCTAT GCTATAAGGC AAGATTTATA TGTAAGTCAG ACATAGCAGC ACCAAGAGAC 000320 000321 AAAACAGACA GTGTTCACTA GGACGAACAA GCGGCTCAAA AGGCACTGGA GTTTCCCTGT AAGAACTACA AACACCACGG 000400 000401 GAGTGATGTT AACTCAGATT TTTCCATATA AAAGATTCTT CCTGTAAAAA |
Predicted Small Protein
Name | ENST00000527725.1_smProtein_155:256 |
Length | 34 |
Molecular weight | 3776.3037 |
Aromaticity | 0.0909090909091 |
Instability index | 50.2396969697 |
Isoelectric point | 7.73870849609 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0405935347111 |
Amino acid sequence | MESTVGCFYVNCSQTHQFSPLRGQDINLKKQCI |
Secondary structure | LLLEEEEEEELLLLLLLLLLLLLLLLLHHHHLL |
PRMN | - |
PiMo | - |