ENST00000525716.2
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000525716.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
3994 nt |
Genomic location |
chr11-:130736149..130740142 |
Exon number |
1 |
Exons |
130736149..130740142 |
Genome context |
|
Sequence |
000001 TTAGCAATCT GGAGAGGACT GAGGCAAGAG CTTGTATTGA AACACAAGCA AGCTCCACGT ATGGTTTTGG ACATGGAAGA 000080
000081 AAGAGTACTG TTGGGGTGGA ATGACCTAAG TTTTTAATAG GATTAGGATT TCTGTGGATT TTTCCCAAGT GATAGAAGTT 000160 000161 TTCTTCATCT AGCAGGGAGC CTCACCCAAT TGCTTCTCTA TGTTCATTTC TGAAACTCCT TTGTTAAAAC TAAATAGCAA 000240 000241 CAGAGAAGAA ACTTTCTTCA AAAAACTCTT CATATCTGTC ATTTCTCCTA TTCTTATGGA ACTTCACAAT TGCTTTTTCT 000320 000321 TTATTCCTTT TTTTTTTTCT ATATCAGCTC ATCAGTCTTT GTGGGTGACT TGGCTACCCC ACTAATCTAA TTGCCTTTTT 000400 000401 GATAGTTAAA TCAATATGGA CATCAACTTA AGGCTATATG TGAACCTTAA ATGCATGATA TTCCCTATAC TTGATTCCAC 000480 000481 AATTGATATT CTGTGAGGAA AGTTGGCCAG ATATTCCCTT CTGTGAAGTC AGAATAACTA CCGACCCTAA GAATAAACAT 000560 000561 TTTGACCAAT TCTTTATATG TTGCAAACTA TTCACACAAC TAGAAAGTTT AGCCATTCAC ATCTCTTCCC CTGATTTTAA 000640 000641 GTCCCAGATT CTGAGACTCA GAAAGTTTAG TGACTTGTTG AGCTTTCTGT GGAAAATCTG TTGTAAAAAC AGTTCAGACA 000720 000721 TTGGAAAATA TAAAATAGCC CCTAGAGATC CCAATAAAGC TTCCTCTCCC CAAATCCCTC TACAAGTTTA TCCTCGAAAA 000800 000801 ACTTTCTGAA AACTGATGAG AAAATACTGA GTAATTAATG CTCAAATGGG AAAGATGACA TGTAAAAGCA AAAACCTGTT 000880 000881 AATGGCATCT GTTCATATAG TTCCATGTGC CTTTTTACTT AACTGCACTG ATAGGCAATG TAATGAAGAA GTTTCCTTTT 000960 000961 AAAACGTAAA ATGTAATTAA ACAGAGTTTA TCTTAAATTG GCTGGACCCG CACAGCTTGA CTGAGACATA CACAGCTGTC 001040 001041 TTCATTTTGA AGCACCTACA CTAGTCAAGC TTCTTTCTAA CCCGCCCTTA GGGTTTGCCT GTTGGTCTGT CTTCCCTACT 001120 001121 GGGCTGTTAA TCCCTTGGAG GCAGATTGTC TTGTTTCCCA GAGTTTTTCC AGCATATACC ATGGCAGACA ATTTTCACCT 001200 001201 TATCTATTCT AACTCGTAAG CCTCAGCTAG TGCCTCCATC CTCGGGTGCA TAGCCCAGTG ACAGGCATGT AACAGACTTT 001280 001281 GCCTACAAGC AGTTGCTGAT CCATAAATGA CGTTGGCAAC CTTCTTGTGG CAGTGAGTAA CATATTTCTT TCCTCCTGAT 001360 001361 AGGCTTGGAA TCCTCATCCC CATCTGGCAA TTTTCTTTCC ATCTTTCCTA CACTCACAAT GGAGCCCACA CGCCTCACAA 001440 001441 CCCCCTTGAC TAAACCAGAT GACAGCAAGA ATGCCTAGTT CCAAGTGAGC AAGGGTGAAG CCTTAGGCCC TTGTCTCCTC 001520 001521 CAGACCTCCT CTCTGCTCTA AGAGTATACT GGGCATGGGG TGTGGTCGGG GGGTTGGGGG CGGAGGAGTA CTTAACCTCA 001600 001601 AACTGAGAAA AAGGGTGTCC TGAGCAAGTT TCATAGCGTA GCAGCTTCCA TTTGAAATGT GAAGCTTTGA AGGCCTGTTG 001680 001681 CTACAGTAAC CAGCTAGCTC CTGACTCCAA TGCCTGTCTA ATCTAAGGTG GAAATGTCCC AGAAACAGAC CCCAGGCTGG 001760 001761 CAGCTCTTAA CTATGACCCA TCTCATAAGC ACATATCCAG CTGTAGCCTC TTGGTTGCTG GGGTGAAGGG GCCTCTGTAT 001840 001841 CGCCACAGGA AAAAAAATCT GATAAATTAC GGGCTCAAGA AGGGTGTTGC TTTTTTTTCC ACTAACAGAC TTTGCAACCC 001920 001921 AGTTCCTGGT GAAAGGGCTC CGCACCCACC CGTTTTGTGT GTATAATGCT GAGCTAAAGT GGGAAGGAGC AGTAACACCA 002000 002001 AAGGAGGCTA ATTCTCTTCC TGTCAGTAGG AGAGAGTGTC TGCCCCCAGT GTGTGAAAAG GGAAGGCATG AGAAGTGAAA 002080 002081 AATCAGCCTT CTGGAAGCAC CTTCTTACCA CGAGAAAACA GGTGATTCTT ACTATCTTTG AGACTCATCC AGATTGTGTC 002160 002161 TGTTTAACTC TTCAGGCAAT ATGAAGGCAG AGAAGCCATT TCAGAGAAGA GATTTTTTAA AAAATCATTT CGTTCTTTGG 002240 002241 CATTGTCACA GGATTATGAT GTGGGTTCTC ATAAAAATTT CACTCCCCCC AAAGCCACCC AAAGGAAAGG CAGTGAAATG 002320 002321 GGGAGGAACA CACATTTGCC TGGCATCGCA AGAGCTGCCT TGTAGTCATG GGTTCCAGTG ATCTTGGACC GATCTCTTCA 002400 002401 CTTCCCTGGA CCTCAGTTTC TTCCATACAA AGAAGTTGAA CTGGATCATA GAAAAGATGC TGTCCAGCTT GGTAATATCA 002480 002481 GATAGGGAGC AGAAGCTGTC TCTTAGCACA TGGCCAGATT CCGGAACAAC GATGATGGTC TCCATGTTTG TCCTAAAAAT 002560 002561 GCATCTCATC TCAGTAGAGA TTTTCTTCCA CCTCATTTGG GTCTCAATTT AAGGAAGGAA GAAAGGAAAG AAACCCGGGG 002640 002641 ATTCTCTTCT TGAAAGGAAT ATACTTCACT TTCTCTAGGC TTCTAGGATA AAAACTTCCT ATCCTTCATT TTTCCTCTTT 002720 002721 AAACCTGCCA AAATCAAGTT GAGTAAAGAT ACCATACAGA TATGAAAAAG AAGCCACATC CTTAAATTTT CATGGAGTCC 002800 002801 AAGAGCCTGC TCACCGCCAG TTAGCTTTTC CCAGGATGGT GGTGGCACTG ATCATCTAGG TTGCACTTTT ATGTTCATGT 002880 002881 CCCAGAGCGT TTCCCATCAG CCATCTCATT TCATCTTTTC ATCATTCCTC TGAGGAAAAG ACTTCACACA TGTATAGGAC 002960 002961 TTTCTATATC ACAAAGTATT TCATATCCAA TGTCTTATTT AGATCTTGAC AATCACTGTT TAAGGTAATT TGGCAAGTTA 003040 003041 TTAATACTCA TGTCCTCATT TTACTGAAGA GGAAACTGAA ATGCAGAGAG CTTGTCTTTT GCCCAGGATC ACTCACCCAG 003120 003121 TTTATTGGGA GGCAGCAGCA CGGGGATTAA GAACATGGGT TATGCCGACA ACCAACCAGG CAGAATTCCA GCTCTGTCAG 003200 003201 TAGTTAGCTG TCTGGCCTTA GGAAAGGGAT TTCACACCTC TGTGGCTTAG TTTCCTTGTC CATTAAATGC TCATAAGAAT 003280 003281 AGAGCTTTCC TCACAGAGAT TGGGTGGGCA CGGGAGCTAA ATGAGCTCAT ACGTTTAAGA ACAACCTCTA GCACACAGTG 003360 003361 CATAATAAAT GTCATTATTA TTAGCAAAGC CAGGACCTGG GTCTTCCAGC TTCTAGCTCA GTGGCATTTC TGCTGCCCCA 003440 003441 CACCAGGACT ATCCTTCGTA TACAGGTATG AACCTAAAGC CTTCAGTGTT TCAATGAAAA GTTCACCCAA GGTCTTTCTG 003520 003521 TTCAGTAAGT CTAGAGCTAA GGGCTCCTGG CACTCTGTTC AGTCCTTTCG CTGGTAAACC ACGCTGCCCT CCGTTGCTCT 003600 003601 GGGCAGAATG TCAAACCTTC TTATGTTTTT AAAATTTATA AATCAAGCAC TCTTATTTAA TATTACTGAC AGCCCGAAGG 003680 003681 CAGACGCTCC CACTCTCCTG GGGAAGAGGG TCTTCTAATC TGCCATCTTA AGGAGGTAAA AGGGCTTGAT TGGGTAACTC 003760 003761 ATTGCAATGG GCACGTATTT ATTACTGTCT CCCGGCCTTT TCTCATGCTG TTTGTCTGCT GGAATTACCA CTAGTGCCAG 003840 003841 GCCATTTGAA TATTTGACCA TTTGTCTTAG AATTCTCTGA ATACAAATGT TTTTCATACC TTTACTATGT ACTTTTTAAG 003920 003921 AATGAAGACT ATGTTGCATG TTGGTTTGTA CTCTCTCCTG CACATAAAAA ATGCTTAGTA AATAGATACA CAAA |
Predicted Small Protein
Name | ENST00000525716.2_smProtein_2180:2380 |
Length | 67 |
Molecular weight | 7735.2294 |
Aromaticity | 0.106060606061 |
Instability index | 43.3545454545 |
Isoelectric point | 10.0468139648 |
Runs | 9 |
Runs residual | 0.0142442387951 |
Runs probability | 0.0398045103928 |
Amino acid sequence | MKAEKPFQRRDFLKNHFVLWHCHRIMMWVLIKISLPPKPPKGKAVKWGGTHICLASQELP CSHGFQ |
Secondary structure | LLLLLLLLHHHHHHLLHHHHHHHHHHHHHHHHHLLLLLLLLLLEEELLLEEEEELLLLLL LLLLLL |
PRMN | - |
PiMo | - |