ENST00000525716.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000525716.2

Source

Gencode19

Same with

,

Classification

intergenic

Length

3994 nt

Genomic location

chr11-:130736149..130740142

Exon number

1

Exons

130736149..130740142

Genome context

Sequence
000001 TTAGCAATCT GGAGAGGACT GAGGCAAGAG CTTGTATTGA AACACAAGCA AGCTCCACGT ATGGTTTTGG ACATGGAAGA 000080
000081 AAGAGTACTG TTGGGGTGGA ATGACCTAAG TTTTTAATAG GATTAGGATT TCTGTGGATT TTTCCCAAGT GATAGAAGTT 000160
000161 TTCTTCATCT AGCAGGGAGC CTCACCCAAT TGCTTCTCTA TGTTCATTTC TGAAACTCCT TTGTTAAAAC TAAATAGCAA 000240
000241 CAGAGAAGAA ACTTTCTTCA AAAAACTCTT CATATCTGTC ATTTCTCCTA TTCTTATGGA ACTTCACAAT TGCTTTTTCT 000320
000321 TTATTCCTTT TTTTTTTTCT ATATCAGCTC ATCAGTCTTT GTGGGTGACT TGGCTACCCC ACTAATCTAA TTGCCTTTTT 000400
000401 GATAGTTAAA TCAATATGGA CATCAACTTA AGGCTATATG TGAACCTTAA ATGCATGATA TTCCCTATAC TTGATTCCAC 000480
000481 AATTGATATT CTGTGAGGAA AGTTGGCCAG ATATTCCCTT CTGTGAAGTC AGAATAACTA CCGACCCTAA GAATAAACAT 000560
000561 TTTGACCAAT TCTTTATATG TTGCAAACTA TTCACACAAC TAGAAAGTTT AGCCATTCAC ATCTCTTCCC CTGATTTTAA 000640
000641 GTCCCAGATT CTGAGACTCA GAAAGTTTAG TGACTTGTTG AGCTTTCTGT GGAAAATCTG TTGTAAAAAC AGTTCAGACA 000720
000721 TTGGAAAATA TAAAATAGCC CCTAGAGATC CCAATAAAGC TTCCTCTCCC CAAATCCCTC TACAAGTTTA TCCTCGAAAA 000800
000801 ACTTTCTGAA AACTGATGAG AAAATACTGA GTAATTAATG CTCAAATGGG AAAGATGACA TGTAAAAGCA AAAACCTGTT 000880
000881 AATGGCATCT GTTCATATAG TTCCATGTGC CTTTTTACTT AACTGCACTG ATAGGCAATG TAATGAAGAA GTTTCCTTTT 000960
000961 AAAACGTAAA ATGTAATTAA ACAGAGTTTA TCTTAAATTG GCTGGACCCG CACAGCTTGA CTGAGACATA CACAGCTGTC 001040
001041 TTCATTTTGA AGCACCTACA CTAGTCAAGC TTCTTTCTAA CCCGCCCTTA GGGTTTGCCT GTTGGTCTGT CTTCCCTACT 001120
001121 GGGCTGTTAA TCCCTTGGAG GCAGATTGTC TTGTTTCCCA GAGTTTTTCC AGCATATACC ATGGCAGACA ATTTTCACCT 001200
001201 TATCTATTCT AACTCGTAAG CCTCAGCTAG TGCCTCCATC CTCGGGTGCA TAGCCCAGTG ACAGGCATGT AACAGACTTT 001280
001281 GCCTACAAGC AGTTGCTGAT CCATAAATGA CGTTGGCAAC CTTCTTGTGG CAGTGAGTAA CATATTTCTT TCCTCCTGAT 001360
001361 AGGCTTGGAA TCCTCATCCC CATCTGGCAA TTTTCTTTCC ATCTTTCCTA CACTCACAAT GGAGCCCACA CGCCTCACAA 001440
001441 CCCCCTTGAC TAAACCAGAT GACAGCAAGA ATGCCTAGTT CCAAGTGAGC AAGGGTGAAG CCTTAGGCCC TTGTCTCCTC 001520
001521 CAGACCTCCT CTCTGCTCTA AGAGTATACT GGGCATGGGG TGTGGTCGGG GGGTTGGGGG CGGAGGAGTA CTTAACCTCA 001600
001601 AACTGAGAAA AAGGGTGTCC TGAGCAAGTT TCATAGCGTA GCAGCTTCCA TTTGAAATGT GAAGCTTTGA AGGCCTGTTG 001680
001681 CTACAGTAAC CAGCTAGCTC CTGACTCCAA TGCCTGTCTA ATCTAAGGTG GAAATGTCCC AGAAACAGAC CCCAGGCTGG 001760
001761 CAGCTCTTAA CTATGACCCA TCTCATAAGC ACATATCCAG CTGTAGCCTC TTGGTTGCTG GGGTGAAGGG GCCTCTGTAT 001840
001841 CGCCACAGGA AAAAAAATCT GATAAATTAC GGGCTCAAGA AGGGTGTTGC TTTTTTTTCC ACTAACAGAC TTTGCAACCC 001920
001921 AGTTCCTGGT GAAAGGGCTC CGCACCCACC CGTTTTGTGT GTATAATGCT GAGCTAAAGT GGGAAGGAGC AGTAACACCA 002000
002001 AAGGAGGCTA ATTCTCTTCC TGTCAGTAGG AGAGAGTGTC TGCCCCCAGT GTGTGAAAAG GGAAGGCATG AGAAGTGAAA 002080
002081 AATCAGCCTT CTGGAAGCAC CTTCTTACCA CGAGAAAACA GGTGATTCTT ACTATCTTTG AGACTCATCC AGATTGTGTC 002160
002161 TGTTTAACTC TTCAGGCAAT ATGAAGGCAG AGAAGCCATT TCAGAGAAGA GATTTTTTAA AAAATCATTT CGTTCTTTGG 002240
002241 CATTGTCACA GGATTATGAT GTGGGTTCTC ATAAAAATTT CACTCCCCCC AAAGCCACCC AAAGGAAAGG CAGTGAAATG 002320
002321 GGGAGGAACA CACATTTGCC TGGCATCGCA AGAGCTGCCT TGTAGTCATG GGTTCCAGTG ATCTTGGACC GATCTCTTCA 002400
002401 CTTCCCTGGA CCTCAGTTTC TTCCATACAA AGAAGTTGAA CTGGATCATA GAAAAGATGC TGTCCAGCTT GGTAATATCA 002480
002481 GATAGGGAGC AGAAGCTGTC TCTTAGCACA TGGCCAGATT CCGGAACAAC GATGATGGTC TCCATGTTTG TCCTAAAAAT 002560
002561 GCATCTCATC TCAGTAGAGA TTTTCTTCCA CCTCATTTGG GTCTCAATTT AAGGAAGGAA GAAAGGAAAG AAACCCGGGG 002640
002641 ATTCTCTTCT TGAAAGGAAT ATACTTCACT TTCTCTAGGC TTCTAGGATA AAAACTTCCT ATCCTTCATT TTTCCTCTTT 002720
002721 AAACCTGCCA AAATCAAGTT GAGTAAAGAT ACCATACAGA TATGAAAAAG AAGCCACATC CTTAAATTTT CATGGAGTCC 002800
002801 AAGAGCCTGC TCACCGCCAG TTAGCTTTTC CCAGGATGGT GGTGGCACTG ATCATCTAGG TTGCACTTTT ATGTTCATGT 002880
002881 CCCAGAGCGT TTCCCATCAG CCATCTCATT TCATCTTTTC ATCATTCCTC TGAGGAAAAG ACTTCACACA TGTATAGGAC 002960
002961 TTTCTATATC ACAAAGTATT TCATATCCAA TGTCTTATTT AGATCTTGAC AATCACTGTT TAAGGTAATT TGGCAAGTTA 003040
003041 TTAATACTCA TGTCCTCATT TTACTGAAGA GGAAACTGAA ATGCAGAGAG CTTGTCTTTT GCCCAGGATC ACTCACCCAG 003120
003121 TTTATTGGGA GGCAGCAGCA CGGGGATTAA GAACATGGGT TATGCCGACA ACCAACCAGG CAGAATTCCA GCTCTGTCAG 003200
003201 TAGTTAGCTG TCTGGCCTTA GGAAAGGGAT TTCACACCTC TGTGGCTTAG TTTCCTTGTC CATTAAATGC TCATAAGAAT 003280
003281 AGAGCTTTCC TCACAGAGAT TGGGTGGGCA CGGGAGCTAA ATGAGCTCAT ACGTTTAAGA ACAACCTCTA GCACACAGTG 003360
003361 CATAATAAAT GTCATTATTA TTAGCAAAGC CAGGACCTGG GTCTTCCAGC TTCTAGCTCA GTGGCATTTC TGCTGCCCCA 003440
003441 CACCAGGACT ATCCTTCGTA TACAGGTATG AACCTAAAGC CTTCAGTGTT TCAATGAAAA GTTCACCCAA GGTCTTTCTG 003520
003521 TTCAGTAAGT CTAGAGCTAA GGGCTCCTGG CACTCTGTTC AGTCCTTTCG CTGGTAAACC ACGCTGCCCT CCGTTGCTCT 003600
003601 GGGCAGAATG TCAAACCTTC TTATGTTTTT AAAATTTATA AATCAAGCAC TCTTATTTAA TATTACTGAC AGCCCGAAGG 003680
003681 CAGACGCTCC CACTCTCCTG GGGAAGAGGG TCTTCTAATC TGCCATCTTA AGGAGGTAAA AGGGCTTGAT TGGGTAACTC 003760
003761 ATTGCAATGG GCACGTATTT ATTACTGTCT CCCGGCCTTT TCTCATGCTG TTTGTCTGCT GGAATTACCA CTAGTGCCAG 003840
003841 GCCATTTGAA TATTTGACCA TTTGTCTTAG AATTCTCTGA ATACAAATGT TTTTCATACC TTTACTATGT ACTTTTTAAG 003920
003921 AATGAAGACT ATGTTGCATG TTGGTTTGTA CTCTCTCCTG CACATAAAAA ATGCTTAGTA AATAGATACA CAAA
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Predicted Small Protein

Name ENST00000525716.2_smProtein_2180:2380
Length 67
Molecular weight 7735.2294
Aromaticity 0.106060606061
Instability index 43.3545454545
Isoelectric point 10.0468139648
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0398045103928
Amino acid sequence MKAEKPFQRRDFLKNHFVLWHCHRIMMWVLIKISLPPKPPKGKAVKWGGTHICLASQELP
CSHGFQ
Secondary structure LLLLLLLLHHHHHHLLHHHHHHHHHHHHHHHHHLLLLLLLLLLEEELLLEEEEELLLLLL
LLLLLL
PRMN -
PiMo -