ENST00000525636.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000525636.1

Source

Gencode19

Same with

lnc-SWAP70-1:4,NONHSAT017943

Classification

intergenic

Length

638 nt

Genomic location

chr11+:9797192..9829585

Exon number

4

Exons

9797192..9797312,9801364..9801489,9801923..9802122,9829395..9829585

Genome context

Sequence
000001 TGCCTCTGGG TTGGTGAACA CATCAGATGC TGGGCAGGTG GTGTGTTGCC TCCCTCCATA CCATGCATCT CTTCCCTTTG 000080
000081 GCTGATCCTG AGGTGTATCC CTTAGAAATA AGCTGGTAAA TAATAATGCT GTGTGCTCCC TCTTTGCCTG CTACTGAACA 000160
000161 ATGACGTCTC TTGTTGTGAA CCCCACTGGC AGAGCACGGA CCATGGAAGC ATCTTTTGGC AGCACCAGAG AACTGAGCAT 000240
000241 CTCAAAGCAT GAGTTCTTCT GTTTCTTCTG CGTGGGTTGA CCATGGGCAT CAGGCATCAG AGATACAACT CTGGATCTTG 000320
000321 TCCATCCATT GCTGGGCACT CTGTCCATCC TGGGCGCAGA AGTTATACAC ACGTTTGCTG GTCTTGAGCT ACAAAACCAA 000400
000401 ATGACAGTGA ACCAGAGATG AAGGGCAGGG CTGTTTTATG GATTTGGGAG TCTACTGCTA AGATTTCAGC ATGTCCTGTG 000480
000481 GCTGAGTTAA TCAGAGTTAT GACAGGAAGG TACCGGGCAC ACCATCGCAA TGCTCCATCA ATGCTAGTAT GTTGTGTTCT 000560
000561 TTCCTTCATA TCAAGTCAAC TCAAGCTTGC TCTACTTACC TGGTGTACAC AGTCTAAGAA CTGTAAGAAG ACTGGAGC
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Predicted Small Protein

Name ENST00000525636.1_smProtein_248:403
Length 52
Molecular weight 5860.7432
Aromaticity 0.117647058824
Instability index 44.468627451
Isoelectric point 8.77105712891
Runs 8
Runs residual 0.00262085032033
Runs probability 0.0285285285286
Amino acid sequence MSSSVSSAWVDHGHQASEIQLWILSIHCWALCPSWAQKLYTRLLVLSYKTK
Secondary structure LLLLHHHHHHLLLLLHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo oooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii