ENST00000525556.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000525556.1 |
Source |
Gencode19 |
Same with |
lnc-ASPH-5:1 |
Classification |
intergenic |
Length |
859 nt |
Genomic location |
chr8-:61878361..61880334 |
Exon number |
2 |
Exons |
61878361..61879016,61880132..61880334 |
Genome context |
|
Sequence |
000001 AGAAAGCAAA AGGGATGCCG GTGGTGGCAG ATGCTTCCTC CTGGCCAAAT CCCAAATCCC ACCCTCAGCA CCCACACCCT 000080
000081 GAGCAGTGGG CAGGAGAGGC CTGAAAACGT CTGTACAAAT GGCTTCCGAG AAGCCCTGGA GATAAAGGAG CCAGAGGCAG 000160 000161 CCACACATGG TTCCCAGAAG CTGAATGCTG CGCAGACGAC AGGAATGACT TCACCCATCC TGCTTCCACC CGCCATAGCA 000240 000241 GTGACCAAAG CAGCACTGGG ACCACAGCTG AGCACCTCAG AAGATAAGTC CTGGGGTGAT TCTTGTCATC TCCGTGAAAA 000320 000321 GGAGAAGACA AAAAGGCAGA GGCTGCTGCT TGAGGATCCC TTCACCTGGG CTGCATAGCT CACCCATGCT GACCAACTTC 000400 000401 CCCATTTCAA GCTTCAGACT CACAGCCGCG CTAGTTAGGG TACCACTTGT TCAGACAGCT GTTTTCATTC ACATCTCCAA 000480 000481 AGGTCCTCTA CCTTAGAAGA AGAAAGAAAG AGGGAAAGAG AAATAAAAGA GATTAATTAA GAACACTGGG GCCAGGCGCA 000560 000561 GTGGCTCACA CCTGTAATCC CAGCACTTTG GGAGGCTGAG GCAGGCGGAT CACCTGAGGT CAGGAGTTGG AGACCAGCCT 000640 000641 GGCCAACGTG GCAAAACCCC ATCTCTACTA AAAATACAAA ACTTAGCCAG GCATGGTGGT GGGTACCTGT AATCCCAGTT 000720 000721 ACTTTGGAGG CTGAGGCAGG AGGATGGCTT GAACCTGGGA GGCAGAGGTT GCAGTGAGCC GAGATCATGC CATTGCACTC 000800 000801 CAGCCTGAGT GACAAGAGAC TCTGTCTCAA AAATAAAAAC AAAAAACAAA AAAACAAAA |
Predicted Small Protein
Name | ENST00000525556.1_smProtein_14:103 |
Length | 30 |
Molecular weight | 3188.4457 |
Aromaticity | 0.0689655172414 |
Instability index | 42.6827586207 |
Isoelectric point | 5.72796630859 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0258788199966 |
Amino acid sequence | MPVVADASSWPNPKSHPQHPHPEQWAGEA |
Secondary structure | LLEEELLLLLLLLLLLLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |