ENST00000524275.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000524275.1

Source

Gencode19

Same with

lnc-EFR3A-1:2,NONHSAT129172

Classification

intergenic

Length

884 nt

Genomic location

chr8+:132320792..132329879

Exon number

5

Exons

132320792..132320918,132322800..132322959,132324803..132324976,132328007..132328130,132329581..132329879

Genome context

Sequence
000001 TTTAGGACTC AGCCCACCTG CACCCAGGTG ATTAAAAAGC TTTATTGCTC ACACAAAGCC TGTTGGTGGT CTCTTTACAT 000080
000081 GGATGCACAA GACACTCTTG ACTTTGATTT TCTGCAGTAT GAATATGGGA CATGCATGAA ATTTGGTGCC GTGACTCAGA 000160
000161 TCGGGGGACC TCCTTTGGGA GATCAATCCC CTGTCCTCCT GATCTTTACT CCATGAGAAA GATCCACCTA CAACCTCAAG 000240
000241 TCCTCAGACT GACCAGCCCA AGAAACATCT CACCAATTTC AAATCCGGAC CCTACTGAAA ATCAGACTGT TCAACTCACC 000320
000321 TGGCAGCCAC TCCCAGAGCC CCTGGAACTC TGGCCCAAGG CTCTCTGACT GACTCCTTCC CAGATCTTCT CAGCTTAGCA 000400
000401 GCTGAAGACT GACACTGCCC AATCGCCTCA GAAGCCTACA GGACCATCAC AGATGCTCTA GACTCAGCCC GCCTGCACCC 000480
000481 AGGTGAAATA AACAGCCATG TTGCTCACAC AAAGCCTGTT TGGTGGTCTC TTCACACGGA TGTGCATGAA ACTACCTACA 000560
000561 CCCATACGGA AGGGAACAAA TCATGAAAAG TAATGGAATG CTACAGCCTA GTCAGTTTTG AGAAAAGGCT AACCAACAAC 000640
000641 AACAACAACA AATCATAGTC ATGCTCAGAT TGCACATGAA CAAAAAAATG TTGGAGAGAA ACCATTGAAA TAACTCACCG 000720
000721 GTCCTCTTGT GTTGCTGCTT ATCTGATTAT CTGAGGTCAA GGGAACTGAG GACAACAAAG GAAATTAGGT CTTTCATAGT 000800
000801 TCTCATTAAA TGCTGGAGGA GTCTGACTAC TGCTGAGCTG AGCACTTCAG CGGCTTTGGA AAAGGAAGTG TGGTTACTTA 000880
000881 TTTC
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Predicted Small Protein

Name ENST00000524275.1_smProtein_131:367
Length 79
Molecular weight 9031.2585
Aromaticity 0.0641025641026
Instability index 65.8538461538
Isoelectric point 6.70550537109
Runs 13
Runs residual 0.0329893683552
Runs probability 0.0315926786516
Amino acid sequence MHEIWCRDSDRGTSFGRSIPCPPDLYSMRKIHLQPQVLRLTSPRNISPISNPDPTENQTV
QLTWQPLPEPLELWPKAL
Secondary structure LLEEEEELLLLLLLLLLLLLLLLLHHHHLLEELLLLEEEELLLLLLLLLLLLLLLLLLEE
EEEELLLLLLHHHLLLLL
PRMN -
PiMo -