ENST00000524275.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000524275.1 |
Source |
Gencode19 |
Same with |
lnc-EFR3A-1:2,NONHSAT129172 |
Classification |
intergenic |
Length |
884 nt |
Genomic location |
chr8+:132320792..132329879 |
Exon number |
5 |
Exons |
132320792..132320918,132322800..132322959,132324803..132324976,132328007..132328130,132329581..132329879 |
Genome context |
|
Sequence |
000001 TTTAGGACTC AGCCCACCTG CACCCAGGTG ATTAAAAAGC TTTATTGCTC ACACAAAGCC TGTTGGTGGT CTCTTTACAT 000080
000081 GGATGCACAA GACACTCTTG ACTTTGATTT TCTGCAGTAT GAATATGGGA CATGCATGAA ATTTGGTGCC GTGACTCAGA 000160 000161 TCGGGGGACC TCCTTTGGGA GATCAATCCC CTGTCCTCCT GATCTTTACT CCATGAGAAA GATCCACCTA CAACCTCAAG 000240 000241 TCCTCAGACT GACCAGCCCA AGAAACATCT CACCAATTTC AAATCCGGAC CCTACTGAAA ATCAGACTGT TCAACTCACC 000320 000321 TGGCAGCCAC TCCCAGAGCC CCTGGAACTC TGGCCCAAGG CTCTCTGACT GACTCCTTCC CAGATCTTCT CAGCTTAGCA 000400 000401 GCTGAAGACT GACACTGCCC AATCGCCTCA GAAGCCTACA GGACCATCAC AGATGCTCTA GACTCAGCCC GCCTGCACCC 000480 000481 AGGTGAAATA AACAGCCATG TTGCTCACAC AAAGCCTGTT TGGTGGTCTC TTCACACGGA TGTGCATGAA ACTACCTACA 000560 000561 CCCATACGGA AGGGAACAAA TCATGAAAAG TAATGGAATG CTACAGCCTA GTCAGTTTTG AGAAAAGGCT AACCAACAAC 000640 000641 AACAACAACA AATCATAGTC ATGCTCAGAT TGCACATGAA CAAAAAAATG TTGGAGAGAA ACCATTGAAA TAACTCACCG 000720 000721 GTCCTCTTGT GTTGCTGCTT ATCTGATTAT CTGAGGTCAA GGGAACTGAG GACAACAAAG GAAATTAGGT CTTTCATAGT 000800 000801 TCTCATTAAA TGCTGGAGGA GTCTGACTAC TGCTGAGCTG AGCACTTCAG CGGCTTTGGA AAAGGAAGTG TGGTTACTTA 000880 000881 TTTC |
Predicted Small Protein
Name | ENST00000524275.1_smProtein_131:367 |
Length | 79 |
Molecular weight | 9031.2585 |
Aromaticity | 0.0641025641026 |
Instability index | 65.8538461538 |
Isoelectric point | 6.70550537109 |
Runs | 13 |
Runs residual | 0.0329893683552 |
Runs probability | 0.0315926786516 |
Amino acid sequence | MHEIWCRDSDRGTSFGRSIPCPPDLYSMRKIHLQPQVLRLTSPRNISPISNPDPTENQTV QLTWQPLPEPLELWPKAL |
Secondary structure | LLEEEEELLLLLLLLLLLLLLLLLHHHHLLEELLLLEEEELLLLLLLLLLLLLLLLLLEE EEEELLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |