ENST00000523307.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000523307.1 |
Source |
Gencode19 |
Same with |
lnc-TNFRSF11B-2:4,NONHSAT128426 |
Classification |
antisense |
Length |
556 nt |
Genomic location |
chr8-:120227351..120259076 |
Exon number |
2 |
Exons |
120227351..120227799,120258970..120259076 |
Genome context |
|
Sequence |
000001 ATGCTCAAGA TCGAATGGCA TCTCTCAGAC TGGAAGACCT TTCTGAAGTC AGTTCCAGAC ATCCCTGGAA GGCTGGATAA 000080
000081 TTTGGGAAAA GGCTGACTCA ATGTAAGCAA TTACAACTGG ATCAAAATCA TGGATCTACA TGCCCATTTC ACCCACTAGA 000160 000161 CTGTGACGTC AGAGTCGGTG ACATTGCCTT CAACATCTCC GTATGCTCAT TACCCAGGGT GGTGCTTTCT ACAGAAGGTC 000240 000241 CTCAATCCAT CCTCCTTGAA ATGAATGGAA ACCAACCGGC ATGTGTAATG AATGGTTCCA AAAGAGAATG CTCTAGGAGT 000320 000321 GCAGCTTGGG ATGCTAGGAA CACACTCCGG TCTGGAGCCC AGCTCACTCC CTGGTTCATG GTGGATGTCC AAAAATAGGC 000400 000401 ATGAAAACGA GTGAAGCGAG AATATGTACT TCTCAATTCT CAAGTTATTA TTGGTGACAC CCACCACCTA GTACCAGATC 000480 000481 TCAGGAGGCT GAGATGGAAA GTTATGGGAA ACTTTGTACC TCTTGCCAGT TGAATTCATG ACACCCAATT TTAAAT |
Predicted Small Protein
Name | ENST00000523307.1_smProtein_260:397 |
Length | 46 |
Molecular weight | 5013.6559 |
Aromaticity | 0.0666666666667 |
Instability index | 56.2711111111 |
Isoelectric point | 9.49444580078 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0384964796729 |
Amino acid sequence | MNGNQPACVMNGSKRECSRSAAWDARNTLRSGAQLTPWFMVDVQK |
Secondary structure | LLLLLLEEEELLLLLLLLHHHHHHHHHHHHLLLLLLLLEEEELLL |
PRMN | - |
PiMo | - |