ENST00000523283.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000523283.1 |
Source |
Gencode19 |
Same with |
lnc-DECR1-1:2,NONHSAT127645 |
Classification |
intergenic |
Length |
772 nt |
Genomic location |
chr8+:91233716..91400216 |
Exon number |
3 |
Exons |
91233716..91233974,91258408..91258498,91399795..91400216 |
Genome context |
|
Sequence |
000001 GTCTTTTCTG GCAGATTACT TCTGTGAGCA ACTGGGTCTC TCAGTTCTTT GGGAGCACCC TGGGAAACAG TGTGGCTATG 000080
000081 ACTTGGAGCT GCTCACCAGT TCCAGTCATT CTGTGGTTGA GAGCTGCTCC CTATGGATGT TAATTCTTCT CTATTTTAGA 000160 000161 TTTTCCACAG GTGTGGGCCC CATTAGCTCT GGCCACCTGA GAAAGCCCTC AGGCAAAGAG TCGCAGGTGA AAGCCAGCAG 000240 000241 TTAGAGGTTC ACAGAAATGA GTGCAGAAGC ATCTTCAGTT GGAGAGCCAT TGCCTCTTGC TGTGAAATAT TTGGGAATCT 000320 000321 TCAGAAACCA TGAAGAATAA CCTGCTAAAG GGTTTTATTT TGTCAGTCAA GCTGGAATGC AGTGGCGTGA ACATTGCTTA 000400 000401 CTGCAGCTTC AATCTCCTGA GGTCAAACAA TCTTCTCACC TCAGCCTCGC AAGCAGCTAG GACTACAGGC ATGTGCCACC 000480 000481 ACGCCCCACT AATTTTTTAA TTTTTCTTTT GTGGAGACGC AGTCTTGTTA TCTTGAACAG GCTGGTCTTG AACTCTTGGA 000560 000561 GTCAAGCAAT CCTTCTGCCT CAGACTCTCA AAGTGCTGGG ATTACAGGCA TGAGCCACCA CATTCAGCCA GGAAAAGTTT 000640 000641 TTGTACATTT AAAAAATTAT AGGATATTTG TGTATATAGC TTTGCTGGTT TGACTTCCTA GAATAGCTCC CAGGAACACA 000720 000721 AAGTACTTAA TTGATTAGTA TAAAATGATT ATGTCATACT CACATGTTGG TT |
Predicted Small Protein
Name | ENST00000523283.1_smProtein_329:499 |
Length | 57 |
Molecular weight | 6113.1436 |
Aromaticity | 0.0714285714286 |
Instability index | 46.3607142857 |
Isoelectric point | 9.41754150391 |
Runs | 11 |
Runs residual | 0.0431303669009 |
Runs probability | 0.0450611038846 |
Amino acid sequence | MKNNLLKGFILSVKLECSGVNIAYCSFNLLRSNNLLTSASQAARTTGMCHHAPLIF |
Secondary structure | LLLLHHHLEEEEEEEEELLEEEEEEEELHHHLLLHHHHHHHHHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |