ENST00000521483.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000521483.1 |
Source |
Gencode19 |
Same with |
lnc-PENK-2:11,NONHSAT126711 |
Classification |
intergenic |
Length |
554 nt |
Genomic location |
chr8-:57432718..57472056 |
Exon number |
3 |
Exons |
57432718..57433126,57456638..57456737,57472012..57472056 |
Genome context |
|
Sequence |
000001 AGCCTGAAAT CCTGCTTCCA CTAAGTACCA GCTGGGTAAC TTCAGGCATC AGTCCTGCCA TGGTTCACAC CAGCAGTGCA 000080
000081 GCCCGTGCTC ATGGAGGTGA AGTGAGAGAC TGGCCTGCAA GAGTGACACA TACAGAGAAG CGGAGGTGGA GCCCAGTTGA 000160 000161 CAGGAAATGT TTCTCCAGAA GCTGAAAAGC TGCCTGGTAA AGGCCTTTCA TAAAATGGTC TGCGTTTGGG ACCAGGAAGA 000240 000241 CAGAAGACTC CTCAAGAAGA GAACTGGAAC CTTAACCCAC TTCAGACTTC TTCATGTCTG AAGCTTATTT CCACCATCCC 000320 000321 ATTGAGAACC AAAGAAGCGA GCTCCTTGGA GAATCGGCTC CCACCTGGAC CTTCTGTTTA TCCTTCCAAT AGCTGCTGCA 000400 000401 TTCATCCTTC CCAGCTAATG ACACTTCCAG CCTTTCGTGT TTCAAAGTAT CACGGACTTT GCAAAAGATT CCAGGTTTCT 000480 000481 ATGGAGCAGA TAGTACTTTT AACAATCAAC ATGTGCATTA TTATTTCCTC CTAAGGCATA CTTAGACATC AATG |
Predicted Small Protein
Name | ENST00000521483.1_smProtein_59:184 |
Length | 42 |
Molecular weight | 4749.2798 |
Aromaticity | 0.0731707317073 |
Instability index | 75.887804878 |
Isoelectric point | 11.2736206055 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0238670042592 |
Amino acid sequence | MVHTSSAARAHGGEVRDWPARVTHTEKRRWSPVDRKCFSRS |
Secondary structure | LLLLHHHHHHLLLEELLLLLEELLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |