ENST00000521159.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000521159.1

Source

Gencode19

Same with

lnc-EVX1-10:8,NONHSAT119678

Classification

overlapping(AS),antisense

Length

800 nt

Genomic location

chr7+:27162167..27173921

Exon number

4

Exons

27162167..27162285,27163079..27163257,27163950..27164229,27173700..27173921

Genome context

Sequence
000001 GCAGCGCTTA CCTAGAAAGA TGTTTAAATT CTGAACCAGG AATTGTCTCC AACTCCAGGC GCTCAGGGAA TCGCCTTTTC 000080
000081 CGGTGTCCAG GCGCTCTGCA GACAAATAAA CAGCAGAAGC AAATGGTCAC CGAGCCGGCA GTCAGCTTTC TGGGAGTGGG 000160
000161 AGATGATGGG GAAAGAGGAA AGAATCGTCC GCTCGCCGGA CCCTGGCTTG GAGAAGTTCT GCGCTCCGCT GGGACTCTGC 000240
000241 GGGCCCTTTG CGTCTACAGA CCTATCCCTG CCCCGACTAC CCCTTCACTC AGACCCAGCC TTCCCCAGCG TGAATCAGAA 000320
000321 CATTACCAAC TGTCTGCGCA TCCGTCCCAC TTCATCACCA AAGCCAGGAT GTGACCGCAG AAAACCCAAG CCCGAACTCA 000400
000401 CGTTTCCCCG GACGCGGCGC GCTCCCTGGA CTCGCAGAAA CCCTGCGGAA AAGGCCCCAA GATCTGGTGA GGGCCTGCCA 000480
000481 GCTCCGTCCT CCCTGCCGAG GGCTCTCTCC TGCCTTCCTG AAGGAGTTAA AAGCCTTTGG AGATAAATCT GAGGGTGTGT 000560
000561 GTTTTTAAAA ATCAAATGAG CGAGAGTCCC CCAGACTGTT CTCTATCTGA TGCATGTCTC TAGAGCTGAA CAGTGGAATG 000640
000641 GCAGAATTTC AAAACGCCTG ATGGTGGCAT TTGAAGGCTT CCCCACCACC TACACTAGAC ACAAGATTTG AGAGGAACAA 000720
000721 CACTTTACCA GCCATTTGAC CAATTAATTC TTTGGGGATA ATTTTCTTGT AGTAGTTTAA AATAATGCAC ACAACGCAGG 000800
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Predicted Small Protein

Name ENST00000521159.1_smProtein_122:373
Length 84
Molecular weight 9077.3136
Aromaticity 0.0602409638554
Instability index 48.7156626506
Isoelectric point 9.61431884766
Runs 11
Runs residual 0.00749665327979
Runs probability 0.0486984310513
Amino acid sequence MVTEPAVSFLGVGDDGERGKNRPLAGPWLGEVLRSAGTLRALCVYRPIPAPTTPSLRPSL
PQRESEHYQLSAHPSHFITKARM
Secondary structure LLLLLLEEEEEELLLLLLLLLLLLLLLLHHHHHHHHLLEEEEEEELLLLLLLLLLLLLLL
LLLLLLLLEELLLLLLLEEELLL
PRMN -
PiMo -