ENST00000521025.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000521025.1

Source

Gencode19

Same with

lnc-RP11-582J16.5.1-1:1

Classification

antisense

Length

2750 nt

Genomic location

chr8-:22471421..22474170

Exon number

1

Exons

22471421..22474170

Genome context

Sequence
000001 TTTTAGTAGA GACGGCGTTT CACTATATTG GCCAGGCTGG TCTCAAACTC CTGACCTCAT GATCTGCCCA CCTCGGTCTC 000080
000081 CCAAAGTGCT GGGATTACAG GGGTGAGCTA CAGCGCCCGG CCTACAAAAT TTTCTAGTTA ACCATCAGGC AATCAAAGCA 000160
000161 CCCCACTCTG CCAAGCGTTC TCAGTGACAA GGGTTTCTGT GCTGTCAGGC TGCTCAGCCA TGCTCCCTGC ACTCTGCGCC 000240
000241 ACCTTCCCTT GCACTAGGTG TGCTACTTAC TAGCTGTGCG GCCTCAGTCC ATGCCGAGCA AGGGTGCAGG GAATGAGCTA 000320
000321 AGGCACAGGA AGCGCTCGGA ACAGAGCCCG GGGTAAAGGT GCGCGGTCAC GGTAAGCACT ATGACAGCCC GAGGTGGCAG 000400
000401 GGTACTCACC AGCGGGGCCT CTGACTCTGT AGCCGGGCCC TCATTCTGTG CCTCATCCTT GGGCTCCTTG ACCACCTCCT 000480
000481 CTTTGATGGC TTCTTCCTCC TTGGTGGCTT CTTCCTTGGC CGCCTCCTCC TTCTCAGGTT CAGGTGGGGA CACGACCTTT 000560
000561 TCAGGAAGGC TCAGTAGCAT CTTATAAACT CTATAGCCAA AATCCCTCTG GAGCATCTCC AGAAACAGCT CGGCCAGCAC 000640
000641 CATCACCTGA TGGGGAGGTG GGAGGGTCCA TGAGCATCAG GAAGAAAGAC TGCTTCAGGC CCACAAATCC CAGCCCACAG 000720
000721 CCTCCCCAAG ACTCTTGACA CCTGCCTCAA AAGAGATCCT TTCCTTTGGC CTCCGATCCT CCACAATCCC ATGGAGGGAC 000800
000801 AGGTTTACAC AGCCAGGGCG TGCGATGACA GCAGGTTCTA GGGGGGGTGG AGGGGCCTCT GGGAGATCAG TGTCCGTTTC 000880
000881 CTGCTGTGTG GTGGCCTCTG GAGTTTCTGC GTTCCGTCTA GAAGTGTCTG CTGCTTGCTC CAAGGCATCA GGTGCCTGTT 000960
000961 CAGTAGGCTC CGTTTCCTGT GACAACAGCT GAAATGAGAC CCTCTGGGTC CCGGGATTAG GCCACCTATA TCCCCCGCTG 001040
001041 CTGGCTAAGG CACAGCCTTA CCCCTTGTGC CTCCTGGGTT GGGGGAGCTG CCTCTGCAGC TTTCTGCTGG CACAGGGCCT 001120
001121 CCCACTCCTC CAAAGTAGGC ATGATGGTCC AGACATCCGG CAGGTACACC ACCACTGTCT GAAGCCGCCG GGGGGGTCCC 001200
001201 GGCTGCAGGT ACTGAAACTC GGCAAAGCGC CACCTGCACA TGGCAAAAGG AGGTACTAAC TTCTTTAGTG ACAACTCCAC 001280
001281 GCAGACACCA CGTTCACAGG CAAGGGCTTC AGTTTCCAGT CAGCACTCAA TGAGCACACA CTGCGAACCA AGCTTTGAAG 001360
001361 ACACAACAGG AAAGCTACAG ACCAAGTCCT CAAGAAATGA TCAGTCAGTG GGGAGGCCGC AACCACACAA GCACCCTACA 001440
001441 AGGTGCAAGG ACAACTCCAG GGAGTCTCAA GTGCAGCCTG GTGGCTCAGC CAGATTTTGG CATACACCCC ACCCTACCCT 001520
001521 GAGGCACCAG AGGGGGAAGG AACGGGACTA GGGGGCAGAG AGCTAACCAG CAGAAAGGGG CAGGGACCGG GCCTTCCCAA 001600
001601 CAAAACCTCC CCAACCTGGT GCGTTGGTGC AGCTGAGGCT CAGGAAGCCC ACTCACCACT TGGTACAGCC GCTCAAATCA 001680
001681 ATGCCAGTCT GGGCCTGCGC ACAGCGGATG GCGGTACGCA CCAGCACCTG CGGGTCAGCC TGGGGGTCGA GGCCATCCAG 001760
001761 GGAAGGAGAC CATTCACCCC CAACCAGCAC TGCCTCCTCT TCTTTCCTGC CCAGCAAAAA CTGCAAGAAG AGATCAGGGA 001840
001841 TACAAAACAA AAAACTACAT TACCTGGGTC TCCCACTGCA GGGCAAGGCT GCCACCCATC AGGATGAAGG CAGCCGGAAG 001920
001921 TGGGGAAGTC CACCACACAG TGAGGTCTCT ATCTGCAAAC ATGAACCAGC CACCTCGCTC TCTCTGACTA GTCGTAACAG 002000
002001 CTCTGAGCTG CACCTTCCTC CTGGGTGAAA TGAGGGGTGT TCGGCTCTGA GATGCCTCGT TTTATGCATT CAGGAACAGG 002080
002081 AGCCGAACAC TCAAAACATG ACAGGTTGTG CACATTACCC GTGAATGCAT CTCCTCCTGC TCTCCAGCTC TTACCTTAAT 002160
002161 CTGCTTCAGA GGATGCTCTG GCGTCTCCCT TGGCTCAGCC ATGTCATCCA CAAAGAGCAT GCAACAACGA TACAATTCCT 002240
002241 CCAACCCCGG GGAAGAGAGC AGCAGTACCT GTGCAGGAGG AGACACTCAG AGCTGCCTTC AGCCTCCAGA AATCAGATAA 002320
002321 GTGAGAGACG CCTGTCAGCT TACCTTCGAA CTATAAGCGG GGTCACTGTC TGCAGTGATG GGCTCAGCAC CAGCGTCTGG 002400
002401 AGCTGCCTCC TTTTCAGAAG AGACCTGGAT CCGGCTTGGA TGATGGAGGG AAAAGGGCTG GCTCAGGGGG AAGGCTGATA 002480
002481 GCCAACTCAG ATGCACGGAC AGAAAATCTG AGGGGACCAG GAGGCTGCGG TAACGGCGCT GGAGTTCTAG GAAGTCACAG 002560
002561 ATGGGGCTAC AGGAAGACAG CAAGGGAATC CAGACTGAGC AAAGACTAAA ACATTCGAAA TGAAACCATC AAAGATTTGA 002640
002641 AAAAATGGGC GAATTTTTTT TCAGTCTGAG AACTTTTGAA GTAAGGCACC TCTCAAGGAA GCTAGATCAG ATCTGACCAC 002720
002721 TTAATTTACA AACTCTAGAT GGCAAAAGTC
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Predicted Small Protein

Name ENST00000521025.1_smProtein_380:586
Length 69
Molecular weight 6454.0617
Aromaticity 0.0441176470588
Instability index 40.3044117647
Isoelectric point 7.99993896484
Runs 13
Runs residual 0.0506756756757
Runs probability 0.032122620358
Amino acid sequence MTARGGRVLTSGASDSVAGPSFCASSLGSLTTSSLMASSSLVASSLAASSFSGSGGDTTF
SGRLSSIL
Secondary structure LLLLLLEEEELLLLLLLLLLHHHHLLHHHHLHHHHHHHHHHHHHHHHHLLLLLLLLLLLE
EEEELEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
LLLLLLLL
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