ENST00000520459.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000520459.1

Source

Gencode19

Same with

lnc-CA2-2:2,NONHSAT127535

Classification

intergenic

Length

677 nt

Genomic location

chr8+:86436128..86452740

Exon number

3

Exons

86436128..86436354,86436806..86437088,86452574..86452740

Genome context

Sequence
000001 TGTCTCTGTG CTCATGACAA GGACATATCA CCTAACTCTG GGCTCTGGCT CACTTAGTAG CTTCTTTGCC GTTGGACTCT 000080
000081 CACACCGAGA TGTCACCGAG CAGCAGCCTT TCCCAGGAAG TTGTTAAGGA GATGGGAATC CTCATGCCTG CTGCTTTTTC 000160
000161 CCAAATCAGA GGAAGCCCGG GAGCCAGTTG CAGTAAAGTC TTGCCAGTAA CGTTTCTCTT AAGAACGAGA AAGCTACTCA 000240
000241 AAGAAATGAT CTCTTCCTGG ATGTTGTGGT CCACGAATAT TATGTCTGGA ACATCAGAGC CATCTTGTCT CCATGATGGG 000320
000321 AGTTCCATCT AAAGACAAAG TCAAAACCCA GCAGAGGACA CAGCTGAAGG AACACGAGAA AGTGGCATGG AAACGCTGAA 000400
000401 GCCCCAGCAC CGGCAGACCT CAGTTATTGG GGCCAATCAA CCTCTTGTTA CTGTTCAAGC GAGTTTGGAA ACGTTGTCAG 000480
000481 AGACCCACAA CAGAAAACAA CTCAAACAGC AAGGGAGATG TGCCCCTACT GGCCAGTGAA GGAGGAAATG GCTGTGAATG 000560
000561 TGGAATCAGA AATCTGGATT GGAACCTGAG CTCAGCCTTT TACTGGCCAT GGGATCTTGA ACAAGTTACT CAACTGAACT 000640
000641 GAATGTCAAT TTCCTAATCA ACAAGACAGT AAAATCA
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Predicted Small Protein

Name ENST00000520459.1_smProtein_89:331
Length 81
Molecular weight 8648.0608
Aromaticity 0.05
Instability index 88.64125
Isoelectric point 8.80255126953
Runs 8
Runs residual 0.0388157894737
Runs probability 0.0445592651475
Amino acid sequence MSPSSSLSQEVVKEMGILMPAAFSQIRGSPGASCSKVLPVTFLLRTRKLLKEMISSWMLW
STNIMSGTSEPSCLHDGSSI
Secondary structure LLLLLLLLHHHHHHHLLHHHHHHHHLLLLLLLLLLLLLLEEEEHHHHHHHHHHHHHHHHH
HHLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -