ENST00000519990.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000519990.1

Source

Gencode19

Same with

lnc-CLVS1-3:15

Classification

intergenic

Length

1173 nt

Genomic location

chr8+:62791441..62798121

Exon number

2

Exons

62791441..62792336,62797845..62798121

Genome context

Sequence
000001 GGTAGGTTCT GACAGTTTCA TCCATCACAA TACAGGCCTC ACCATGTCAC TGCCTCAGAC TGATAAATGC AAAATGACAG 000080
000081 TCATTCATCC GGTGGAATAG AAGAAGCCAG GGAAAATACA ACATGAAGTC ACTTATGCCA TTTGATATAG CTTTGCAATG 000160
000161 TGTATCTTTT CTCTCCCCTA TCTTTTGTTT TGTTTGTGTA CATGCCAGCA TGATTATAGT CTTTGCAAAA ATATATACAA 000240
000241 GACAACACAT TTCCCTAAAA TAAAAAAGTA TGAATTTAGA AAGATTATAG CTACATTAAA ATGAATTCAG AATCTACTAT 000320
000321 GACATAAATA GAATTAGTTA AAGATTAAGG TTAGAAAGTA AATGTCACTT CTTAACTTTT TCTCTTTCTT GCTATTGAGG 000400
000401 AGCACAATCT AAAATTTGTA GGCAGATAGA GTATAAAAGT AATGTACAAT TATGGCACTT ATACTATTTT TTTCTTTTAT 000480
000481 ACAACAATTC TACAAAAATA ATGACTATAT GTACACATTA AAGGAAACTG TAGATTTACT GAAAAATAGG TATTAATAAT 000560
000561 ATGGATATCA ACAGCTGTGT ACCTTTAATT TAAAAATTAA AAAAATAAAA ATAACAGTAA ACTGAAAGTC TCCATTCTCT 000640
000641 CATCTTCCTT TTCCTATGTT TATTTTTAAA CAAATTATAC TGCATATATC GATATCTATT AGGGTCATGT GTTGACTTAG 000720
000721 CAATAAATTT AATTATTGGT TTAGATATCT TACAGATGTA TGGAATCTCT AATATACACA TTTTTGTTTA ATATGTTACT 000800
000801 GAGAAAGAAG CTCAAGTGAT AGAAATAACA CAGGACAGGA AGTAAGACAG TTCTCGTCTG AAGTTCTTCT CTGACAGCCC 000880
000881 ACAAACTAGT TAATATATGT GCCTGTCACA GTCTCCACCA GAAGCTTTAT CTTACTACAG AGTCCAGATG CATTAAGGCT 000960
000961 GTGTTCGAGC CATGATCTTC CTCTGAAGAA GAAATGAAGA AGAAATTTAT CTTATTTTTG GATATAGTGT TCTTAGTTGG 001040
001041 CAGTTTAATT ATTATTTTTA CTTCATCACT TTGTATACGT CATCGCACTT TCTCCTGGCC TATAAGATCT CTCCTGAGAA 001120
001121 ATTTTACGTT CTACTTTACT GGAACTTCAT TAAATATTAT TTGCATCATT TTT
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Predicted Small Protein

Name ENST00000519990.1_smProtein_122:262
Length 47
Molecular weight 5278.4557
Aromaticity 0.130434782609
Instability index 44.2826086957
Isoelectric point 9.05755615234
Runs 6
Runs residual 0.0309265010352
Runs probability 0.062827533416
Amino acid sequence MKSLMPFDIALQCVSFLSPIFCFVCVHASMIIVFAKIYTRQHISLK
Secondary structure LLLLLHHHHHHHHHHHLLLLEEEEEHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo ooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii