ENST00000519603.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000519603.1 |
Source |
Gencode19 |
Same with |
lnc-ADAMTS2-1:1 |
Classification |
intergenic |
Length |
624 nt |
Genomic location |
chr5-:178804532..178805762 |
Exon number |
2 |
Exons |
178804532..178804929,178805537..178805762 |
Genome context |
|
Sequence |
000001 AGGCAGGCAG CTGCTCTGCC CGAGACTGTC AGGAGTTGGT GGATGTGAAT CCATGTCTGA AGCCCAAGCT CTCACTACTC 000080
000081 TGCTGTCTCC CTGAGGGGTG CATGAAGGCC CCAGCCCAGC CAGTGACACA GAGGTTGGGA AGACCAGGGC GTGAAGCTTC 000160 000161 TGTGCTTGGA GAACAGGAGG GCTTGTGGAG CTGTGGTTGA TGGCGTGTCC AGGAAGCCTG GCCAGGCTGG GGTCTGGCAA 000240 000241 CAGCCTCACC ACGATGGCAT GGCGGTGGGC CCGGCCTCTA CCCGCTGCGC CACAGCTCCT GGCTCCTGGC TCCAGGTCAT 000320 000321 CTCTGCCCAC AGCCAGTGTC TCTGGTGAGC CTGGGCAGGT GGGAGGCCGA AGCTGTGCCC CACTGGTTTG GATGCTGAGC 000400 000401 TCTGGGGTGA CCTGCACCCT GTAGTCCTAC AGTTCACACG CTATGGATGC CTGAAGGGAT GGGTGTCCCG TTTCTGAAAC 000480 000481 CCACAGAGCA GCCTTGATTG GGAGGCGTCC TGTGCCCATC TCGTGCCCCC CGTCCTTCTC CTGCGTCCAG GTTCTGGTTC 000560 000561 TGCCGCCTCC TCCGCACGCT GCTCACCAGC CTGCTAAGTG GATGTGAATA AACAATCATG CAGG |
Predicted Small Protein
Name | ENST00000519603.1_smProtein_101:199 |
Length | 33 |
Molecular weight | 3409.8522 |
Aromaticity | 0.03125 |
Instability index | 62.040625 |
Isoelectric point | 7.97698974609 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.035064476241 |
Amino acid sequence | MKAPAQPVTQRLGRPGREASVLGEQEGLWSCG |
Secondary structure | LLLLLLLLHHHLLLLLLLLEEELLLLLEEELL |
PRMN | - |
PiMo | - |