ENST00000518964.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000518964.1 |
Source |
Gencode19 |
Same with |
lnc-FAM84B-7:1,NONHSAT128983 |
Classification |
intergenic |
Length |
585 nt |
Genomic location |
chr8-:126934615..126963493 |
Exon number |
4 |
Exons |
126934615..126934791,126948484..126948577,126958177..126958426,126963430..126963493 |
Genome context |
|
Sequence |
000001 AAGAATTCCC TCCCACCCCC AGATTTTCGC AGGGTTTTGT TGATTTCCCC TCAACTTTCC ACAGGTATCC CACTTCTAAG 000080
000081 ATGCCTGATC TGAAGGACAG TAAAACAACT GACCTTTGCC AGCATGTAAA ACACATGGTT TAACTAGTCC TCCAGGAACA 000160 000161 ACACTGAGCA ATCCTGACCT GGGACTACTT TACTCGGCCA TCTCCTACTT GAGATGCTCC TTGTCTCTCT GTTCAAGGAC 000240 000241 ACCTTTTCTG AGCCTTTCTT GAACAAGAGT GGAGGACCGA TAGGGCGATT AAACTGTCCT TGACACAACT TTAGAGCTTC 000320 000321 AACTGAGAAT CTAGAAGAGA GTAGATGGAA AAATATTTTT CCCTCCCCTC CAAATGCAAG GATAATCTTA CACGAGTCCA 000400 000401 GGAGGAAGGC TCATTCCACA CTAAGTGTTC TGAATCAAAA AGATGAACAA AATACAGTGC CATTCTTCAA GGACTTCACA 000480 000481 GTCTACAGGA AAGGGATATA GTTAAACAAA TAACTGCAGA ATTGGAAATT GGAGCTGATG TGCTTAGAAG TGTTTTGAAC 000560 000561 AAGGGGCATG ACTGTGACTC TCTCT |
Predicted Small Protein
Name | ENST00000518964.1_smProtein_344:445 |
Length | 34 |
Molecular weight | 3894.3723 |
Aromaticity | 0.0909090909091 |
Instability index | 56.3515151515 |
Isoelectric point | 8.73822021484 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0447043682337 |
Amino acid sequence | MEKYFSLPSKCKDNLTRVQEEGSFHTKCSESKR |
Secondary structure | LEEEELLLLLLLLLHHHHHHLLLEEEELLLLLL |
PRMN | - |
PiMo | - |