ENST00000518362.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000518362.1 |
Source |
Gencode19 |
Same with |
lnc-TNFRSF11B-1:1 |
Classification |
antisense |
Length |
1408 nt |
Genomic location |
chr8-:120075181..120081021 |
Exon number |
2 |
Exons |
120075181..120075479,120079913..120081021 |
Genome context |
|
Sequence |
000001 ACTTCATTTT GTCACACTCT GGCTTGTAAT TATCTCATAA TGTCTGCAGA TGCTCAGGAG GAAAGTTAAT GAGATTTCCA 000080
000081 CTGTTTGAAG TTTTAACAGG GTTTCTAATG GGAAAATGGG AAGGGAGAAG TTTTCTATTA GGTAAAAAAT AGTGCTATTC 000160 000161 TCAAATGGAT TCTCCCATTT GCAGGGACAA GGAAAACTTT AATTTTCAAT GCCCCCATGA CACCCCAGGA ATAATCTAAA 000240 000241 GTTTCCTATA CTCTAAGGAA ACTTCAGTAA CGGTTTTAAG CAAATACTTT ATTTCTAATC AAAACTTTCT TTCTGAACAT 000320 000321 TTGCCCTCGC ATTATTCATT TATTCACCCA AGAAATTATT TGGAAGCTCT AAGCTCTCAT TGTTCCTCAC AGCATTTATT 000400 000401 TTATCGTATC AAAGGTTAAA ACTTGGATTG CAATCTTAGA GGAAAATTAA TTCAGTGATT AAGAAAAATG CACTTTAAGC 000480 000481 AATACACATT TAAATAACTG ACAGGCATGG GGCAATGTAT TTCTGAATTT TGTTTTTTGG AAAAACACTT TTTTCTACTT 000560 000561 AAAATTTTAG GCAGCTGCAA TTCTTCTACC CTATAGCCTG GAGAAACAGC ATGAATTACT AATAAGGGAG CACCAATCTG 000640 000641 CAGTGCAGTG ACCACTTTCA GAACAAAAGG GTGAAAGCTA AAACCAGAAA AATAGATTTT TTAAAATCTA CTGGTTGCTT 000720 000721 AAAGCATATT TGGACCTTGG CTGTACTTGA GAACATTTTG CAATATTCTA CCATCCTTGA GCAGAAGGCA TTTGGCCCCA 000800 000801 GAGACTACAC TTCCAAATAA AGAAATGTTC ATTTATATAC TACCTTCAAT GCTTGACAAA ATGTTTCCAT CCTCTACGTT 000880 000881 GGAACTCAGG ATCCCATTAA CTTATGAAAT ATATATTTAA GATTTAAGTT TTATGTTACT GACCTTTTGC TTAAACAGCT 000960 000961 TTACCAGCAT CAGTATTAGA AAGGAGGAGA GTACAAACAG TGCAATAATA GAGGTGCTTT TAAGGAAGGA AAGGGCTTCT 001040 001041 GGAGACTCAT GCCTGGATTG TGCATCTGCC CCGGAGCAGA ATGGAACAGG GAATTTCCCC CTGCCCTGGT AACTGGAAGA 001120 001121 AATGACACAT CAAAACATTT GCTCAGTGCC TGACAGAGAC CCAGCAACAT CTGTTCTTGT GCATTTTAAT GATCATGCCT 001200 001201 CCAGCTTCCT GATATTTTCC TGGAAGGAAA ATAAATTCCA GGATACGAAA AAAGCATATC CTAAGGCAGA AGTATTTTAC 001280 001281 TAGTTAAAAC AGCATAACAG TACAATGACA ACCTCATCTC CAGAAGGGAT TTCTTGACAA ATTGATATAA CTCAACTTTG 001360 001361 GACTTGGTTT CAGCTTTGTC CATTCAAATA AGTAATTAGT GGATTAAA |
Predicted Small Protein
Name | ENST00000518362.1_smProtein_932:1111 |
Length | 60 |
Molecular weight | 6463.2671 |
Aromaticity | 0.0677966101695 |
Instability index | 50.2983050847 |
Isoelectric point | 4.76678466797 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0419411007647 |
Amino acid sequence | MLLTFCLNSFTSISIRKEESTNSAIIEVLLRKERASGDSCLDCASAPEQNGTGNFPLPW |
Secondary structure | LEEEEELLLLEEEEEELLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |