ENST00000518362.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000518362.1

Source

Gencode19

Same with

lnc-TNFRSF11B-1:1

Classification

antisense

Length

1408 nt

Genomic location

chr8-:120075181..120081021

Exon number

2

Exons

120075181..120075479,120079913..120081021

Genome context

Sequence
000001 ACTTCATTTT GTCACACTCT GGCTTGTAAT TATCTCATAA TGTCTGCAGA TGCTCAGGAG GAAAGTTAAT GAGATTTCCA 000080
000081 CTGTTTGAAG TTTTAACAGG GTTTCTAATG GGAAAATGGG AAGGGAGAAG TTTTCTATTA GGTAAAAAAT AGTGCTATTC 000160
000161 TCAAATGGAT TCTCCCATTT GCAGGGACAA GGAAAACTTT AATTTTCAAT GCCCCCATGA CACCCCAGGA ATAATCTAAA 000240
000241 GTTTCCTATA CTCTAAGGAA ACTTCAGTAA CGGTTTTAAG CAAATACTTT ATTTCTAATC AAAACTTTCT TTCTGAACAT 000320
000321 TTGCCCTCGC ATTATTCATT TATTCACCCA AGAAATTATT TGGAAGCTCT AAGCTCTCAT TGTTCCTCAC AGCATTTATT 000400
000401 TTATCGTATC AAAGGTTAAA ACTTGGATTG CAATCTTAGA GGAAAATTAA TTCAGTGATT AAGAAAAATG CACTTTAAGC 000480
000481 AATACACATT TAAATAACTG ACAGGCATGG GGCAATGTAT TTCTGAATTT TGTTTTTTGG AAAAACACTT TTTTCTACTT 000560
000561 AAAATTTTAG GCAGCTGCAA TTCTTCTACC CTATAGCCTG GAGAAACAGC ATGAATTACT AATAAGGGAG CACCAATCTG 000640
000641 CAGTGCAGTG ACCACTTTCA GAACAAAAGG GTGAAAGCTA AAACCAGAAA AATAGATTTT TTAAAATCTA CTGGTTGCTT 000720
000721 AAAGCATATT TGGACCTTGG CTGTACTTGA GAACATTTTG CAATATTCTA CCATCCTTGA GCAGAAGGCA TTTGGCCCCA 000800
000801 GAGACTACAC TTCCAAATAA AGAAATGTTC ATTTATATAC TACCTTCAAT GCTTGACAAA ATGTTTCCAT CCTCTACGTT 000880
000881 GGAACTCAGG ATCCCATTAA CTTATGAAAT ATATATTTAA GATTTAAGTT TTATGTTACT GACCTTTTGC TTAAACAGCT 000960
000961 TTACCAGCAT CAGTATTAGA AAGGAGGAGA GTACAAACAG TGCAATAATA GAGGTGCTTT TAAGGAAGGA AAGGGCTTCT 001040
001041 GGAGACTCAT GCCTGGATTG TGCATCTGCC CCGGAGCAGA ATGGAACAGG GAATTTCCCC CTGCCCTGGT AACTGGAAGA 001120
001121 AATGACACAT CAAAACATTT GCTCAGTGCC TGACAGAGAC CCAGCAACAT CTGTTCTTGT GCATTTTAAT GATCATGCCT 001200
001201 CCAGCTTCCT GATATTTTCC TGGAAGGAAA ATAAATTCCA GGATACGAAA AAAGCATATC CTAAGGCAGA AGTATTTTAC 001280
001281 TAGTTAAAAC AGCATAACAG TACAATGACA ACCTCATCTC CAGAAGGGAT TTCTTGACAA ATTGATATAA CTCAACTTTG 001360
001361 GACTTGGTTT CAGCTTTGTC CATTCAAATA AGTAATTAGT GGATTAAA
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Predicted Small Protein

Name ENST00000518362.1_smProtein_932:1111
Length 60
Molecular weight 6463.2671
Aromaticity 0.0677966101695
Instability index 50.2983050847
Isoelectric point 4.76678466797
Runs 7
Runs residual 0.0258124708443
Runs probability 0.0419411007647
Amino acid sequence MLLTFCLNSFTSISIRKEESTNSAIIEVLLRKERASGDSCLDCASAPEQNGTGNFPLPW
Secondary structure LEEEEELLLLEEEEEELLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -