ENST00000515882.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000515882.1 |
Source |
Gencode19 |
Same with |
lnc-PACRGL-1:1 |
Classification |
intronic(S) |
Length |
601 nt |
Genomic location |
chr4+:20393812..20396479 |
Exon number |
4 |
Exons |
20393812..20393886,20394973..20395076,20395189..20395282,20396152..20396479 |
Genome context |
|
Sequence |
000001 AGCCTATTGC TCCTAGGCTT CAAACCCATA CAGCATGGCA CTATATGGAA TACTGTAGGC AATTTTAACA CAATGAATCC 000080
000081 TGACCCTTGG GAATGGGATC TGGAGCCAGT GGGAAGCATT CTCCGAATAT GATAATGTGG TTATCTTCTG ACGAGTGCTG 000160 000161 GCATTATCAC TTGTTGCTAA AAAAACACCA GGCTTGTTCT GAGGTTCACC CGACTCCACT GCATGTATTA CGTGCATGTG 000240 000241 TACCTTGGAA TGGAAAATAC ATGACTAAGC CCTGAGACAA CTCTGCACTG TATCCTGCTA TTCTTCCAAC TGCAGGACCT 000320 000321 CATGGAGCGA GAGATCCAAA CCTTTCTGAA GTACTTTACC TTCTACCTTT TTCATGCTAC TCAGGATTGA ATCAATTGGA 000400 000401 AGCCAACAAA GCCATTCTGT GTTACTGTGC CTCCTGACTG TCAGCACGCT GCACTGTGCA TTTAGATAAT TCTGCCAGAA 000480 000481 GGCATTTTTA TAAAAACAGC TTTCAAAATC TATTCTTGAA AAGACATTTG TATACTCATT ATGCCATTCT ATCATTTATC 000560 000561 CATAGGGAGT TCTGTAAATA AAACACTGAG GTCTAATACT A |
Predicted Small Protein
Name | ENST00000515882.1_smProtein_92:274 |
Length | 61 |
Molecular weight | 6827.9196 |
Aromaticity | 0.0833333333333 |
Instability index | 68.5583333333 |
Isoelectric point | 8.96014404297 |
Runs | 10 |
Runs residual | 0.0169326241135 |
Runs probability | 0.0499911676383 |
Amino acid sequence | MGSGASGKHSPNMIMWLSSDECWHYHLLLKKHQACSEVHPTPLHVLRACVPWNGKYMTKP |
Secondary structure | LLLLLLLLLLLLEEEEELLLLHHHHHHHHHHLLLLLLLLLLLHHHEEEEELLLLEEELLL |
PRMN | - |
PiMo | - |