ENST00000514877.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000514877.1 |
Source |
Gencode19 |
Same with |
lnc-ARAP2-5:1,NONHSAT095976 |
Classification |
intergenic |
Length |
546 nt |
Genomic location |
chr4-:34125128..34271369 |
Exon number |
4 |
Exons |
34125128..34125346,34127423..34127484,34260709..34260848,34271245..34271369 |
Genome context |
|
Sequence |
000001 TGACAGACTG TTCAGTCTTT AATAATGTGA GAATAAACAG AATAAATTAA AAGCACACCA TATTCTTCTC AGCTTCCTCA 000080
000081 GGGGCTTTGT CCAAACAGCT TGAACAACTG CAAAATAATA TTCAGGAACC ATGATAGTGT TTGGTACATA GAGGACACTG 000160 000161 GAAATGGTTT TCTTAACTGA ACAAGTGACT AGAATAAAGG AATTAATGAA CGACATCAGA GCTGAAATCC CAAACCATAA 000240 000241 ATCATAAAAG GATCAGACAG CAAAGAGTAC TCAAAAGCTG ATTTATTGAG ATCCTGATGA GTTTGAAGTA ACTAGAAACT 000320 000321 TGATCAAGAC CCTGACTAAT ATAAGATGAT TTTTTAAAAC TGGAATCTCA GTGGATTCGT CTCAACACGG CCAGATGGAT 000400 000401 GATTCTTCCA GGGACTAATG AACTTGTTAG AATTTCGGAT AACATTTGGT TGTCAAAAAA AAAAAAAGAG CATAAAAAGT 000480 000481 AATAGACCAT AACTGAGATG GGTGGGGCTT ATTCTAGATA AGATAGTCAA GGACTGACAT ATGGGA |
Predicted Small Protein
Name | ENST00000514877.1_smProtein_398:481 |
Length | 28 |
Molecular weight | 3206.8022 |
Aromaticity | 0.037037037037 |
Instability index | 42.0074074074 |
Isoelectric point | 9.99749755859 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0409291644586 |
Amino acid sequence | MILPGTNELVRISDNIWLSKKKKEHKK |
Secondary structure | LLLLLLLLEEEELHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |