ENST00000514473.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000514473.2 |
Source |
Gencode19 |
Same with |
lnc-DAD1-2:1,NONHSAT035765 |
Classification |
intergenic |
Length |
1951 nt |
Genomic location |
chr14-:22849083..22951948 |
Exon number |
3 |
Exons |
22849083..22850808,22950230..22950347,22951842..22951948 |
Genome context |
|
Sequence |
000001 TTTGCAGAAG GGTCCTGGGG GTCAATATAG TCACGATTGC TCAACTCTTC ATTAAGCTAC AGGTTTATAG GTTATTTGAT 000080
000081 AATAAGTCCA GAATGCAGCT GCTGTAGGAG CTTCTAATGC ACTTCTCTAT TACTTCAAGA ACACTGTGTA TAATAATAAA 000160 000161 CTCTACAGAA ATAAACCAAA TCACAAGAAG CTTTCAGGTC TGGAGGCTGA CATTTCTCAA GACAGATGAA GAACCTGAGG 000240 000241 CTCACCTTGC TTAAGTGACT TGAGCAGCTT CATGCATCTT GTAAGTAGTA GAGACAGAGT CAAAACCAGA TCTTCCTGCC 000320 000321 CTCTCTATCA TATAAACCAC TTACACTGAA TTACAAAGTG AAACTGATCT ATGGTGAATT GTACTAATGT TCTGCTTCTG 000400 000401 CCATGGGCAC CAGAGGAGAT ACCTTTCTTT GTTGACACTA ATCTCAAAGG CTAAATTAGA TCCCCCAAAC TCATTTCCAT 000480 000481 TAATAACATG TCAAAGGCTT GTGTCATGCG TTAATTTATC CAAAGTGATC TTGATTCTAT TTACATTTTG GTGCCACCTT 000560 000561 TTAATGTCAC CATTTTTATA AATTAAATAT GTAATATATA AAGCCAGTCT TCACTTACTG ATATGTTAAT TTTTAACCCA 000640 000641 AACTTCTTAG TCTGACATTC CAGCAATACC GGAGCATTAA CAGTTGATAA TAGCTCTATG TGCTACCTCT CCAAGAAACA 000720 000721 AATTTGCATT TTAACCTGCC CCTTCAATGG CTGAACTTCA AAGGGTCACT GATGAATGCC ACAGCAGGTT GGTGGGAATA 000800 000801 TAATTCTTTT TATGGATAAT ATTTGTGTGT GTATGTGTGT GTGTGTGTTA AATCCTACCA CATAAGTCAC TAACCTATGG 000880 000881 GTAAGGCCAG TCTTGACCTA AAATGAGGAA TTCTGTAAAA TTTCAAATGC AAATCACATT TTATTTTTGA TGTTAGAGAA 000960 000961 AACTGCAAAT TGGAACAGCA GAGCTGTGCC TCTGGCCATT TCCTGGAACT ACAGAGGAGC AACTTGCCCC GGTTTCCAGT 001040 001041 GGGTGATGTT CCTCTTCTGC CACAGTCCCC AGCGATGTTG ATGTGATTGC CATCAGAGCT CAGAAGCACA GAGCAGAATC 001120 001121 ATCCCCTGGA GGAGGATTCC CTTCAGTGTA AGAAGTTCTT ACAGAATTAA TCCTCAAAGA CTGTGGGTGG ACTCTGCCAG 001200 001201 GTTTTTCCCC GGGTGTACCA GAAGAGAGGA AGAGCCCTCA AATACAGGAA AGTGCTCTTT TCAGTGACAG TATTTCTTTT 001280 001281 GGGCCCTGTG GCTAAGTGTG CTCCCACCCC AGCAGTAAGA TCACAGCTAA TCCTGAGAGG CAAGAGCTCA CACCAGGCTA 001360 001361 CTGAAAGAAA AAGTGTCCTT TGTGGATTGC AAGAGGAACT GGGACACACT GCTGGAAATG AAGTGGCAGG TCATAAACTA 001440 001441 TCATAAACTC AGGAGGAGAG GTGTTCCTTT TTGAGACACT CATCACAACT AGAGAGAATG CAGCTAAGAA AATGCAGTCT 001520 001521 TTAGGGGGAC CTGGACTGTT GAAGTATTTG AGCTATTCGG AGGAAATAGA AACTTGGAAG AGATCTTTGT TCCACTATTA 001600 001601 TTTGGCAGCC CCTTACCCGC AGCTGCCATT ACTCCAGATT CTCTCTGATG ATCCTGCATC AGGAGAATGA GTTGACTGGG 001680 001681 CACCACTGGG AAATGTGGGC AGCTCCAGGC TGAACTAGAG AAGGGGCATG TCAAAGGTCA CTTATTTGTG GCTTGACCCT 001760 001761 TTGGAGGCCA GATGTAAGAA TCAATTTCTC ACAGGTCCCA TGCTAACGCT TTTCATATTT ATTTCCATCT GAGACTCACT 001840 001841 TAGGCTAGGC AAATATCCCA TGGGTCTGTA CCTCTCCAGT GCTTTCTTGC TCATGTAAAA TTAGCTCATT GGAATGAATA 001920 001921 AAGAGAATGG TATTACTTTG GCTCGAACAC G |
Predicted Small Protein
Name | ENST00000514473.2_smProtein_386:580 |
Length | 65 |
Molecular weight | 7456.0283 |
Aromaticity | 0.125 |
Instability index | 56.9734375 |
Isoelectric point | 9.30108642578 |
Runs | 8 |
Runs residual | 0.02359375 |
Runs probability | 0.0296215332979 |
Amino acid sequence | MFCFCHGHQRRYLSLLTLISKAKLDPPNSFPLITCQRLVSCVNLSKVILILFTFWCHLLM SPFL |
Secondary structure | LEEELLLLHHHHHHHHHHHHHHHLLLLLLLLLEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHL LLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTo oooo |