ENST00000513875.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000513875.1

Source

Gencode19

Same with

lnc-C4orf33-1:1,NONHSAT098296

Classification

intergenic

Length

1777 nt

Genomic location

chr4+:130692814..130876523

Exon number

17

Exons

130692814..130692842,130701165..130701254,130724147..130724270,130728159..130728303,130733157..130733220,130733817..130733915,130734829..130734940,130746495..130746607,130755365..130755479,130758526..130758580,130783723..130783923,130821693..130821809,130829789..130829858,130870232..130870292,130874429..130874494,130875533..130875731,130876407..130876523

Genome context

Sequence
000001 CTTTGGAGTC TAGCTAACAC AGCATCTTGG ATGCACTCCT AAGAGAAGAC TACCTGAAAG GCGTGTACAC TGGTCTAGCA 000080
000081 GTTGAGATCA GCTAGTGTTC CATCTATCTT CTGTCATGTG GAGGAGTTCT TGCTCTGTCA CCTAGTCTGG AATGCAAGGG 000160
000161 CACAATCATA GCTCACTGCA GCCTCATACT CCTGGACTCA AATGATCCTC CTGCCTCACC CTCCTGAGTA GTTGGGACTA 000240
000241 CAGGCTATAC TGGTTATTGT GGATCCAAAA ATCCTAGGAC ACAGACTTTG CCCTCAAATT ATTTACTGCA TAGTGGGTGG 000320
000321 CCTGAAAAGC AAACATAAGC ACTAAATATG GAAAAATGCA AAAGGCAATG GGACCATAAA AGGAACAGAT CTCTTCTAAG 000400
000401 ATGTCTTGAT CGACTGACCC CAAAGCCAGA GGGTACCAGG TCAAAAAGCA AGAAAACAAA CAATACTGAC ATTAGAGAGA 000480
000481 AGCAAAGTTT CTATAGAAAA CCTATTACAC TGTGGTATAA ATCAAGATGA ACCTGCAGAC ATCTATTTTA GTTTGGAAGT 000560
000561 CTGGAAAAGT TCAAGATTGG CCATCTGCAG CTGGTGAGAG CCTCAGGCTG CTTCCCCTCA TGGTGGAAGG TGAAGGGGAG 000640
000641 CTGGTGTGTG CAGAGATTAC ATGCTTTTCT AGGTCATCAT TCTAGGCTTT GTTGAAGCAT GCATTTTTGG CATGAGGGTG 000720
000721 GCAGCCTTTG CACTATGTGC ATGGCTGAGG AGTTAGGATC TGGAGGGTGA TGAAAGCAAA GGTGCTGCTG GTTACTCTTG 000800
000801 GTTCATCTAG CAATAGATGA TCTGAATGTT AGAGTTCGCC AAATATTGTT CCTGGGCAGT CTTTGCTCTA CCAAATCAAC 000880
000881 TTTCTCCATG GGGGAGCTAG AAGTCACCCC ACATTCTCCG CCATGGCCAG CTCTACATTC TAAGAGAACC AATGGCTCTA 000960
000961 CCCAACATAT TCTTCTCACC ACAGATGACA AAGACACAAG GAGCCAAGAC AGATCATTCA AGCATATTCA TTGCCTCTAT 001040
001041 CTTCATCCCA TTAAATAACA TCCCGCCAAC CAAAGCAAGT TATCTGCATA AGAATAAATA TTCCACCTAC TCTACTGCAA 001120
001121 GGCCCTGCAA GAGTCATGAG ACAAAAGGAT CCTCTGTGGA CAGCACCCAA GATGGAAACA ACTGACAGTC TATGGCCAGG 001200
001201 GCTATACTCT GGTGAAACTG AAAGGTGTCT GCATGGAAGT GTCTGACTAC CACCATCCAC TCAGGCAAAT GCATTTGTTT 001280
001281 CCCTCTATTC ATTATTAGAA GAGAGGAGAT TACATACCAG ACATATACCA ATAGGTTTTC TCTTCATAAT ACCTACGTCA 001360
001361 TCTAGTAGCA TAACATAAGG CAGAATCCTT CAAAGATTTT CACCTGAACT TTTCTTGAGC ATCTCTAGAC AGTCACATGC 001440
001441 AGAATAACAA CTGGGTTTTA GGTGTACCAA GTTCTTAGTA TGGAAAAAAG ATATCCTACA AAATTTTGTC TCTACACATG 001520
001521 TTGAAGTTCA TCTCTCACCC CTCTCTACTC TCTTACTTAT GCTTCAAGCA AATGGAATTA CTTTTTTTCA TACTGAGACA 001600
001601 TTAAAACAGG AAATCCTTCT TCCTAGGACT CCTGTTCACC ACCACTACCT CTACACATAG CAGATCCACG TAAGACACTT 001680
001681 GCATCCAAGA CAAGTCAGAA TGATTACATA TGAAAGTTTT AATTGCACTG TATGGGGATA TTGCTGTGTT GTGAATTAAA 001760
001761 TAAGAATTCA TATTTTC
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Predicted Small Protein

Name ENST00000513875.1_smProtein_347:529
Length 61
Molecular weight 7438.5472
Aromaticity 0.0833333333333
Instability index 65.8068333333
Isoelectric point 10.6216430664
Runs 10
Runs residual 0.0169326241135
Runs probability 0.0473591238296
Amino acid sequence MEKCKRQWDHKRNRSLLRCLDRLTPKPEGTRSKSKKTNNTDIREKQSFYRKPITLWYKSR
Secondary structure LLHHHHLLLLLLLHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHHHEEELLEEEEEELL
PRMN -
PiMo -