ENST00000512942.2

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000512942.2

Source

Gencode19

Same with

lnc-RP11-10A14.4.1-2:4

Classification

intergenic

Length

699 nt

Genomic location

chr8+:9046521..9060364

Exon number

4

Exons

9046521..9046556,9046858..9047096,9056434..9056501,9060009..9060364

Genome context

Sequence
000001 GGAAACCCAC GCTGAGGGAA GAATCATGGG AAAGAGTAGA GACGGGGTTC CACCGTGTTA GCCAGGATGG TCTCGATTTC 000080
000081 CTGACCTCGT CATCCTCCCG CCTTGGCCTC CCAAAGTGCT GGGATTACAG GCTTGAGCCA CCGCGCCCCG CTCTTTCGTG 000160
000161 TTCCAAAGGC TTTTTAAATA AACTTCCACT CCTGTCCTGG ATTCTGCTTT ATGGCCCTCA GTCGAATTCT TTCTTCTGAG 000240
000241 GAGGCAAGGA CTGAAGTTGC TTCTGACCAG TACAGGAGAA AACGAATACA GCAGGGATGA CTTCCACCAG CTCCACTTTG 000320
000321 CAGCTCTGAG GTGTATTAAA AATGACCTGG AAGAAGTCAT GCCACGGGCC AGACCTTAAC ATTCCTTTCG GCTTACCCCA 000400
000401 GGATTTCAGA CAAAGCTTCA CTTTCCTAAC CAGTCACAAA TCAGAGAATT TTTGATTCCA CCTATGACCT GTGAGCTCCT 000480
000481 GCTTCAAGAT ATTCCACCTT TTTTAGGCCA AACCAATGTA TAACCTCCAA GTGTCGATTT ACACTTTCGA CTGTAACTTC 000560
000561 TGCTTTCCTG AGATTTACCC CTGCCTTTAA AAACCCTTGC TTGTAATCCC TCAGGGAGGC CGTGTATTTA TTAATCATGA 000640
000641 GCTGCCCAAT TCTCCTTGCT TGGTGCCCTG CAAATAAACA CCCTCTTTTC TCCCACTGC
[back to top]

Predicted Small Protein

Name ENST00000512942.2_smProtein_341:454
Length 38
Molecular weight 4342.8662
Aromaticity 0.162162162162
Instability index 75.5108108108
Isoelectric point 7.97894287109
Runs 7
Runs residual 0.009422266303
Runs probability 0.0173871350342
Amino acid sequence MTWKKSCHGPDLNIPFGLPQDFRQSFTFLTSHKSENF
Secondary structure LLEELLLLLLLLLLLLLLLLLHHHLEEEEEELLLLLL
PRMN -
PiMo -