ENST00000512942.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000512942.2 |
Source |
Gencode19 |
Same with |
lnc-RP11-10A14.4.1-2:4 |
Classification |
intergenic |
Length |
699 nt |
Genomic location |
chr8+:9046521..9060364 |
Exon number |
4 |
Exons |
9046521..9046556,9046858..9047096,9056434..9056501,9060009..9060364 |
Genome context |
|
Sequence |
000001 GGAAACCCAC GCTGAGGGAA GAATCATGGG AAAGAGTAGA GACGGGGTTC CACCGTGTTA GCCAGGATGG TCTCGATTTC 000080
000081 CTGACCTCGT CATCCTCCCG CCTTGGCCTC CCAAAGTGCT GGGATTACAG GCTTGAGCCA CCGCGCCCCG CTCTTTCGTG 000160 000161 TTCCAAAGGC TTTTTAAATA AACTTCCACT CCTGTCCTGG ATTCTGCTTT ATGGCCCTCA GTCGAATTCT TTCTTCTGAG 000240 000241 GAGGCAAGGA CTGAAGTTGC TTCTGACCAG TACAGGAGAA AACGAATACA GCAGGGATGA CTTCCACCAG CTCCACTTTG 000320 000321 CAGCTCTGAG GTGTATTAAA AATGACCTGG AAGAAGTCAT GCCACGGGCC AGACCTTAAC ATTCCTTTCG GCTTACCCCA 000400 000401 GGATTTCAGA CAAAGCTTCA CTTTCCTAAC CAGTCACAAA TCAGAGAATT TTTGATTCCA CCTATGACCT GTGAGCTCCT 000480 000481 GCTTCAAGAT ATTCCACCTT TTTTAGGCCA AACCAATGTA TAACCTCCAA GTGTCGATTT ACACTTTCGA CTGTAACTTC 000560 000561 TGCTTTCCTG AGATTTACCC CTGCCTTTAA AAACCCTTGC TTGTAATCCC TCAGGGAGGC CGTGTATTTA TTAATCATGA 000640 000641 GCTGCCCAAT TCTCCTTGCT TGGTGCCCTG CAAATAAACA CCCTCTTTTC TCCCACTGC |
Predicted Small Protein
Name | ENST00000512942.2_smProtein_341:454 |
Length | 38 |
Molecular weight | 4342.8662 |
Aromaticity | 0.162162162162 |
Instability index | 75.5108108108 |
Isoelectric point | 7.97894287109 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0173871350342 |
Amino acid sequence | MTWKKSCHGPDLNIPFGLPQDFRQSFTFLTSHKSENF |
Secondary structure | LLEELLLLLLLLLLLLLLLLLHHHLEEEEEELLLLLL |
PRMN | - |
PiMo | - |