ENST00000511514.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000511514.1 |
Source |
Gencode19 |
Same with |
lnc-MED10-8:1,NONHSAT100159 |
Classification |
intergenic |
Length |
545 nt |
Genomic location |
chr5-:5046909..5049610 |
Exon number |
2 |
Exons |
5046909..5047327,5049485..5049610 |
Genome context |
|
Sequence |
000001 ATGGGCCAGC AGGCACAACT GGACACTGCT GCTCTACTCC TGACCAGTGC TTTCTCATAT GCTAGTCACT GGCTGAACGC 000080
000081 GGCCGCTGAG CAGTCGAAAG TAGACTAGTC TGAATTGAAA TGTGCTTTCT TTATTACAGT GGGAAGTCCC ATGGACCGAA 000160 000161 TTCAATTGTC CTATGAAGCG GAACTTTCGT CCTAAAAATC AGAAGTAGCT GGTGTTGGAC TCAACATGAT CCCAAACTCA 000240 000241 CCTAATAGCT GCCTCTGAGA ATGCAATTTT CAGTCAGGAG CACAAGAGAA GTGCTCATTA AAAGTGCTCA TGGAACTTCA 000320 000321 TTAAAAGTTC CATGTTTGGC CAAAACCCCA GAAAAAAAAA ATCAGTCAGT ATTTTCAAGG TCCCACCTGG CTTGGTTCAT 000400 000401 CATCCACAAT GAAACGATTG AAAAAAATGC ATGTGCCTGA CCCAGGTTCT TACTCATAAT GTTTCTGTCT GAAATGTGAA 000480 000481 GTTGCTGTCA CCTGCCTGTA GACAGAATAT TTAAAAACGA GAGTTCATGG TTTTAGTTGA GACTG |
Predicted Small Protein
Name | ENST00000511514.1_smProtein_260:439 |
Length | 60 |
Molecular weight | 6669.6721 |
Aromaticity | 0.0677966101695 |
Instability index | 51.8474576271 |
Isoelectric point | 9.78338623047 |
Runs | 10 |
Runs residual | 0.0250349867828 |
Runs probability | 0.030462815757 |
Amino acid sequence | MQFSVRSTREVLIKSAHGTSLKVPCLAKTPEKKNQSVFSRSHLAWFIIHNETIEKNACA |
Secondary structure | LLEEEEHHHHHHHHHHLLLLLLLLLLLLLLLLLLLEEEELHHHHHEEEEHHHHLLLLLL |
PRMN | - |
PiMo | - |