ENST00000511422.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000511422.1 |
Source |
Gencode19 |
Same with |
lnc-PRR16-1:3,NONHSAT103449 |
Classification |
intergenic |
Length |
1114 nt |
Genomic location |
chr5+:120116913..120126473 |
Exon number |
2 |
Exons |
120116913..120117201,120125649..120126473 |
Genome context |
|
Sequence |
000001 ATTCATGGCT GAAGCGTCTG AAACAAGACT AACAAGACTA ACGAGATTAA CAAGAGAAAA ACATACAAAT TTTTAAAATA 000080
000081 TAAGTTGTAT GTGACATAGA AGCATTTATA AAGAAAAGAA GACCAGAAGA AACGGGTAGA CCTGGGTATT TTTATGCTAC 000160 000161 TTTTGATGAA AATGGGAATG CTTTTGGAGA CGCATGAGTG AATAAAAAAA TATGATCTAA TGGTAATAAA CTAGAGGAAA 000240 000241 CAGAGCAAAG TCTGTTCAGA TTCTTCTCTG TGATGCTTTG TCTTCAGAGC TCCTTCAGGT TGGAAGGAAT ACCTTTACTT 000320 000321 GGGGGCATGT CAATTCGTTT TTCTCACTTG ATTCATCTTT ATGACTTCCT GAGGACAGAT CTAATTCTAA AGTAACCAGA 000400 000401 AGCCTGGCCA TCTCAGAGCA GCAAATCCCT CAACCTTGGA GCACAAATGA TCGCTGATAG AGTCTGCATA AAATCATCTT 000480 000481 CCTCTATCTG ACAGCCATGA GCAGAGCCTT GGGGGTAAAA AAAGCCACAG CCTTAAATCT CTTCACTCAG AAATTACCAT 000560 000561 GAAGATAAAA TAAATAAATG GAAAGGACTA TCAAGAAGCC AACAAAACAT AAACACCAAA CCAACTCATC TTGTTTCACT 000640 000641 TTGGAAATAA ACTGTTCCCA GATGTGAGAC CAACAAAATT AATATTAAGC AATTAAACCA GTAAATTATA AACTGATTTA 000720 000721 TCATTTGGGA AGTTTAAAGT ACAGAGAGAT GAGGTACCTG TAGCCAGAAT TACACATCAT TTCAAAATAT GTAGACAAAA 000800 000801 AGAAAACTGA ATGAACAGAG AAACATTGCA GCAATGCACA GTCTTAGGAC GAATGTTGCT GTTTGCAGAC AGAGAATGTT 000880 000881 TGCCATCTTG TGTATAGCCT CAAAGCCATA CTGAGATAAT AGCATTGTTG TCAATTGCTT GAAAAATTTT CACATTCAAT 000960 000961 CCTTCATGCT ATATTGGTTG GAAGAGGAGG GAAGTCAGTT CTTACTGATT ACTTCTCAGT GAACTTCTAA TATTTGCACT 001040 001041 GTCACTTCCA TTCAGGGTAA TGATGTGTGC TGTTATTTGC ACAGATGGTC CCATGAGTTT TGAGACCACA GCAA |
Predicted Small Protein
Name | ENST00000511422.1_smProtein_272:394 |
Length | 41 |
Molecular weight | 4648.5594 |
Aromaticity | 0.1 |
Instability index | 64.37 |
Isoelectric point | 7.99859619141 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0450198097257 |
Amino acid sequence | MLCLQSSFRLEGIPLLGGMSIRFSHLIHLYDFLRTDLILK |
Secondary structure | LEEELLLLEELLLLLLLLLHHHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |