ENST00000509350.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000509350.1

Source

Gencode19

Same with

lnc-MTBP-1:1,NONHSAT128456

Classification

intronic(AS)

Length

1973 nt

Genomic location

chr8+:121773493..121789072

Exon number

5

Exons

121773493..121773612,121778018..121778104,121780899..121781938,121787515..121787766,121788599..121789072

Genome context

Sequence
000001 AAGACAACAG GGACCCCCTA AAAACAAGGA CACCAGCAGA AATTTTAGCC TCTGACACCT ACAGTTACAG CAAACAATAA 000080
000081 ACACAGACTA ACTTCTAGGC AAATAAACAA ACAAGAGATG GAGCACATTC AAGTCACAGC AGTGGCCATG ATAGCTAGAG 000160
000161 TTTCAGAAGC CATTCTGTGA CCTGGAGCAT GGAAAGAAAG TGCTAAGATG TTGAAAGAGA GAGAGGATGA CGTCCTGTGA 000240
000241 ATGTGCTTCA AGTCCTTATC AGCTTGTTAC TCTGGAAACG TGGTGAATCT ATTCCGAGCC TCAGTTTTCT TCTCTGCAAA 000320
000321 AGATGGCCAA TAATCCTGGA GTTTTGGATG GTATGGGGAA GAAGAAAATG CCTGATGCAT CCCTGCCCTC CTCACATTTT 000400
000401 TAGAAGAGAC AGAGACTTGA TCTACTTCTT AGGAAAGGGC AAGACTGAAA GAAAATTCAG GTCCATCTCA GTGGCTCCCC 000480
000481 ACCACAGGTG GAGAGGCTAC TACTAATCAG ACTGATGCAC ACTACCAGTG GGTGCCTTAA AAGAACGACA GACTCCCAGC 000560
000561 CTCTCTCTTG GCCTGTGGAC ATAGACCTGT TTGCCTCACC TGGCAGGTCC AGCCAGGCGT CTTCTCTCTC AGTTCCAGAC 000640
000641 AAGGCATCTG ACGGTGTGGA TCAGCCAGTT TAGACCCAGG GTCCCTCTAT TTGAAATTCA GGGCAAAAGG GGTAGAACAA 000720
000721 GCCCCCATTT CAGCTGGAGG AAGTGTGGCT TTTGGCACAG TTTTAGCACC AATAGAGTTG ATTATTTTGA TCATCATTTG 000800
000801 GCAATAGTTC CTTATATCCT TTTTTCAAGC AGATTTCTGG ACAAGAGGAA CCCAGTCAGA ACCTTTTCCA GAAGTATTAA 000880
000881 GTAACATAGT AAATATGACC GCACCTGCTT TGACACTCCT CCTATTGACA AGTGAGTCAA TTTCTCCTCT TCTTTAATCT 000960
000961 GGAGGAGCTC TGAGACTGCT TTGACCAGTG GAGCACATGG CAGAAATGAT GTTGCTCCAG TTTCTAGGCC CAGACTTTCA 001040
001041 GAGACTAGCA GCTTCCACTT CCTGTCTCCT GGATGCTCAT TCTGGGTTGG GGGGGCGGTG GTGCCAGCAG CTATGTAAGA 001120
001121 AGTCTCACTA TCTGAGATCA CCATGCTGGA GGAAGCCCAG GTCAACCACA TGGAGACACT GTACAGAGGG AGCTGCTCCA 001200
001201 AGAATCCTCA ACTGATCCAG CCATCTCAGC CTAGGGGTTG CAGTCAGGCT TTGAATCCCA GCGACATTCA TTCCGCAACA 001280
001281 TACTAACCAC ATCCTGGTGA TCCCAGCTTC AGAGAGGAGA ACACGGGGAC TTGAGTTCAC TGTTGCGGTG AAGTCCTGCT 001360
001361 CTGGCCCCAG GCAGAAGTCA AGATCAAAGC TCACACTGCA AATATTGTGC TGATTAAAAC CAAACTTTCT GCTTTTGATG 001440
001441 TGGGCCAACC TCCATTGCTG GTAGGAACAA AGGAGGAGTA TAGCAAAAAG ATACTAGCAA TGTTTTCTTA TCCTGGGTTA 001520
001521 CCACCTACAT TGTTTCTTGG GGAGAAGGAT GCCTGACTCC TACAGAGTAA TGAGACACAA GGAGGGTGCC TGAGCCATTT 001600
001601 CTACAGACTC CAAGAGGTTC TAACCAGCCC AGGTCACTTC CACTTTTGAG ACCTGTGGAC ACGTTATGAT GTTATGAAAT 001680
001681 GCCAGAGCAG GATTACCAAA ACTCTCACAT ATTTGTAAAT GCTTGTATTT TGCAAATGAC CCTTATTTAC AACCAAAATA 001760
001761 AAACTTCGTT TGGGAACAAT GTCAAGAGTC TTAATGTGAG GCCTTTTATG AATACAAGGC CTCCTGCTAA ATGGCCCACC 001840
001841 TGCTTCCCCC TCATAAGCCT GGTCATATCA GTACCCCCAG GAGCTTGGCA CATGGTTTTC ACATGGTGAA TAATGAAAAA 001920
001921 GTACTTCCTA AATGAATAAG TGCACACATG GATGAATAAA CAATCTACAT GTC
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Predicted Small Protein

Name ENST00000509350.1_smProtein_347:505
Length 53
Molecular weight 6456.5704
Aromaticity 0.153846153846
Instability index 78.05
Isoelectric point 10.9474487305
Runs 10
Runs residual 0.041938287701
Runs probability 0.0439674969087
Amino acid sequence MVWGRRKCLMHPCPPHIFRRDRDLIYFLGKGKTERKFRSISVAPHHRWRGYY
Secondary structure LLLLLEEELLLLLLLLLEELLHHHHEEELLLLEEEEEEEEEELLLLLLLLLL
PRMN -
PiMo -