ENST00000509185.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000509185.2 |
Source |
Gencode19 |
Same with |
lnc-MARCH3-1:1,NONHSAT103598 |
Classification |
intergenic |
Length |
914 nt |
Genomic location |
chr5-:126087655..126112178 |
Exon number |
4 |
Exons |
126087655..126088113,126091229..126091404,126098057..126098143,126111987..126112178 |
Genome context |
|
Sequence |
000001 TATCAGGCAA CTTCTTTCCA TGAAAGTGAG ATCTGTGCGT CTTGAAGCCG ATAGATTATC ACAGAAAAAC CAGCAACCCT 000080
000081 GATTTTAAAT CATTTGCCAA CAGTGTTAAT GGGCGGTTCC TAATCCGTTT CTTAATTTAA GGGTTTGTAA AATCAAAAAA 000160 000161 CAGCTCAGAA ATGATACGAT TAACATATGA CGATTTAAGT TGGGTTGATC TCAAAGTGAA GGATGGAGAA ATGAATTCTC 000240 000241 TATTGTCATA AGGAAAAGGG AAGTCATGAA GTTAGAAGGG GCTTGTATCT GAAGGCCTCT GGCCAATGTG CCTGCTGCCA 000320 000321 TTTCCTCTGT CCCTGAGGTC TCCAGAAGAG AAAGGAGCTC CAGCCTTGCA TTCTTTGGGT GTGGAGAGGA GCAGAGCAGA 000400 000401 ATGGAGCCTG CAGGTCATGC CAGGAGTCAC CGCAAGGCTG TGGCTGTCAG CTCAGAATTC CATCATCACT TGGGAGATTT 000480 000481 CTGCGAATCA TCACTAAAGC CATTCACTTT CTCATAACTA AACAAGAATC TTCTTCTGGA GTTAAGTATC AGATATGAAT 000560 000561 GTTCTCACTG ACCTCAGGAA GCAAAAGTCC TAAATCATTA TATGGCAGTG AAGGTACAAA AAAAAAAAAA AATCAGCAGG 000640 000641 AAATAAAGCG GAACTGCTGC CAACACATAC AAGCTGCAGT AGCACCCACA AAATGTGTAG TATCTATTCT AACACATTCA 000720 000721 TTGGACTGAT TACATTGGCT CATAGACTTG GTTAACTCTG GAAGAACATA ATAGGTGTTT ATTGTTTACT ATGGGGATGG 000800 000801 GAAACATAAT TAAGTCTATA GTCTCCAATT CTTCTCAAGT TCAAATGAAA CCAACACTTT TGGTTTTGTC TTAACATTCA 000880 000881 GGATGTGTTT CTAATTAAAC TGAAATCACA GTAA |
Predicted Small Protein
Name | ENST00000509185.2_smProtein_305:496 |
Length | 64 |
Molecular weight | 7021.028 |
Aromaticity | 0.0634920634921 |
Instability index | 74.0682539683 |
Isoelectric point | 6.81683349609 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0436220534259 |
Amino acid sequence | MCLLPFPLSLRSPEEKGAPALHSLGVERSRAEWSLQVMPGVTARLWLSAQNSIITWEISA NHH |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHLLLLLLHHHHHHHHLLHHHHHHHHHHLLLEEEEEEEL LLL |
PRMN | - |
PiMo | - |