ENST00000508269.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000508269.1 |
Source |
Gencode19 |
Same with |
lnc-ANAPC10-1:2 |
Classification |
intergenic |
Length |
1094 nt |
Genomic location |
chr4-:145564074..145567139 |
Exon number |
2 |
Exons |
145564074..145564886,145566859..145567139 |
Genome context |
|
Sequence |
000001 GCGGCGGGGA GGGGCGGCTA GCCGCGACGG CGGCGGACGG AGGGGGAGGG CCGCGAGCCT TCGGAACCAG CCTCGAGGGT 000080
000081 GCTGAACCCC GCGCGCCCGC CTCGCCGCGG CCCCCGGGTG GGGGCGTCCA CGGCCCGGGT TCCCGGCGGG CTTGGGGCAG 000160 000161 GGACGCAGTC CGGAGATTCC GGGACTGCCC GGCTGCTGCA GCCCGCAGGC TCCTCTCTCC TCCCCGCTTC CCCTCCGCAC 000240 000241 TGCCTGGGCT AAAGGCGGCC AAGCTGAGGC TCCGAAAGAA AAGGGAAAAT TGCAACCCTT GCCTACAACC AGACTGACAG 000320 000321 CATAATTTCT TAGGAATCAA GAATCAATAC AGGGTTATTT CTTTAGATTA AACCTTAAAA GCCCCCTTGG AGGCTGAAGA 000400 000401 AGCAGAGGAT AGCCATGCAT ACACTTGAAC GTGAAAAATG GTCCTCTTTC ATTGGAGAGG TCTTCCTCTT CAGCTAAACC 000480 000481 GACAGAGTGG TGAAAAGAAG AAGGGACCCC TTGTTGACCA AAATAATCCA GACAAATCAA ATCGGCCCTT TCCAGCAAGG 000560 000561 AGTGGAACAG CCCAAGGGTG GCTAGATCAC ATCTTCTGCT CACACCACCA CTGAGCAACC CTCTCCAGGA CTGCCACCTA 000640 000641 TGCATAGGTC ATGCCCTGTG CAAGAGCACA TAAAGTGGGA GCTGAAGTCC TGCCCAGGCT CCATTCACCA AGCAGAGCTT 000720 000721 ATGTTGTTGT GTGTCTGTGT CTACCCAGAG GATGTGGGTC CTTTTTAAAA TGTGCACCAA TGCATCTTGT ATGAGCTGGC 000800 000801 ACCAGCTCGG ACCATCCCAC CCTCATACCC TGGTCCTATC CAGGGTTATA TTCCCTACTT TAGAAGAATT AATTATTTTT 000880 000881 ATGAACGTAT TTAGTTTATT GTAAAAAATG AAATATATGA CACAAATTGA AATTAATTTC AGAGGTAAAG GTCAGAATAT 000960 000961 TACCATGTAT GTGAATTATG TTTGTATGTA TATGTATATA TCAAGAGAGT TATATGAATA TACATTTTTG TGTATCAGAA 001040 001041 GTGAGGACAA TTTAACTTTG TTAAGTGTTT GAAATAAAAT TATTTTGAGT TTTG |
Predicted Small Protein
Name | ENST00000508269.1_smProtein_437:613 |
Length | 59 |
Molecular weight | 6685.4939 |
Aromaticity | 0.0862068965517 |
Instability index | 50.3155172414 |
Isoelectric point | 10.0204467773 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.04485578015 |
Amino acid sequence | MVLFHWRGLPLQLNRQSGEKKKGPLVDQNNPDKSNRPFPARSGTAQGWLDHIFCSHHH |
Secondary structure | LEEEEELLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |