ENST00000507948.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000507948.1

Source

Gencode19

Same with

lnc-NUDT12-2:1,NONHSAT103061

Classification

intergenic

Length

555 nt

Genomic location

chr5-:102744642..102748212

Exon number

2

Exons

102744642..102745088,102748105..102748212

Genome context

Sequence
000001 TCAGCAGAAT ACCTGCTCAG CTTCTACAGT GAAGGAGGGG CTCAAGGTCA CCAATGCAAA ACCCACCTGA GGTGGATGCC 000080
000081 TCCTGTAGGA CGCACTGAAG CACCAAAGTT CTGCCAGGAA TTCATTGATG AAAGCAGATG ACATCTGAGA TAATACCTGG 000160
000161 TCAGACTCAC CTTAAGCCCA TGGAGGATTT ATCTTTGTTT CTACCAACTG TACAATAAGA TTTTAAAATA GCACATTCTT 000240
000241 AATTGTCTGT ATTTATGTAT ATTCTCCTGA AAAACTGTTA TGTAAGCAGA TTTTCTTTAA ACATGCATCC AAAGGAAATT 000320
000321 CCCAAGTCAA TTAGTTCATA CTAAGAGAAT ACAAACTTAT TTAACATCAA CCTAAGTAAA ATCCACTGGA GAAGATAAGT 000400
000401 GTGTAGCTTA GAATTACAGA TTGTATTCTC TAGTCAAAGA TACATAAATT AGGCCTTAAA AAGTTACTTT GGATCATGTT 000480
000481 TACTTTTATT ACTGTCTATC TGGATAGATA ATTGGATGTT ATTGCTCATC CCTCATTTTC TAGAATGAGT GTTCT
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Predicted Small Protein

Name ENST00000507948.1_smProtein_254:343
Length 30
Molecular weight 3463.0982
Aromaticity 0.137931034483
Instability index 58.2310344828
Isoelectric point 9.42999267578
Runs 7
Runs residual 0.0418103448276
Runs probability 0.0417518358696
Amino acid sequence MYILLKNCYVSRFSLNMHPKEIPKSISSY
Secondary structure LEEEEELLEEEEELLLLLLLLLLHHHLLL
PRMN -
PiMo -