ENST00000507948.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000507948.1 |
Source |
Gencode19 |
Same with |
lnc-NUDT12-2:1,NONHSAT103061 |
Classification |
intergenic |
Length |
555 nt |
Genomic location |
chr5-:102744642..102748212 |
Exon number |
2 |
Exons |
102744642..102745088,102748105..102748212 |
Genome context |
|
Sequence |
000001 TCAGCAGAAT ACCTGCTCAG CTTCTACAGT GAAGGAGGGG CTCAAGGTCA CCAATGCAAA ACCCACCTGA GGTGGATGCC 000080
000081 TCCTGTAGGA CGCACTGAAG CACCAAAGTT CTGCCAGGAA TTCATTGATG AAAGCAGATG ACATCTGAGA TAATACCTGG 000160 000161 TCAGACTCAC CTTAAGCCCA TGGAGGATTT ATCTTTGTTT CTACCAACTG TACAATAAGA TTTTAAAATA GCACATTCTT 000240 000241 AATTGTCTGT ATTTATGTAT ATTCTCCTGA AAAACTGTTA TGTAAGCAGA TTTTCTTTAA ACATGCATCC AAAGGAAATT 000320 000321 CCCAAGTCAA TTAGTTCATA CTAAGAGAAT ACAAACTTAT TTAACATCAA CCTAAGTAAA ATCCACTGGA GAAGATAAGT 000400 000401 GTGTAGCTTA GAATTACAGA TTGTATTCTC TAGTCAAAGA TACATAAATT AGGCCTTAAA AAGTTACTTT GGATCATGTT 000480 000481 TACTTTTATT ACTGTCTATC TGGATAGATA ATTGGATGTT ATTGCTCATC CCTCATTTTC TAGAATGAGT GTTCT |
Predicted Small Protein
Name | ENST00000507948.1_smProtein_254:343 |
Length | 30 |
Molecular weight | 3463.0982 |
Aromaticity | 0.137931034483 |
Instability index | 58.2310344828 |
Isoelectric point | 9.42999267578 |
Runs | 7 |
Runs residual | 0.0418103448276 |
Runs probability | 0.0417518358696 |
Amino acid sequence | MYILLKNCYVSRFSLNMHPKEIPKSISSY |
Secondary structure | LEEEEELLEEEEELLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |