ENST00000505532.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000505532.1 |
Source |
Gencode19 |
Same with |
lnc-TMEM144-1:3,NONHSAT098986 |
Classification |
antisense |
Length |
2227 nt |
Genomic location |
chr4+:159092525..159122065 |
Exon number |
5 |
Exons |
159092525..159092632,159098064..159098198,159100813..159100887,159119940..159120022,159120240..159122065 |
Genome context |
|
Sequence |
000001 CATTTCTCTG CCGCATCCAC ATGTTGAACG GAGTTTAAAG TCTGCAGTTG GCTCCTGCTA ATGTGATGCA TGGTTTCCTG 000080
000081 ACTTCAGCTG CCGCGTCCGC TTCGGGATTA GGAAAAGTGC TTTTGGAGAA AATCACCTGT CTCCTCAGAA CTGGTCTTAC 000160 000161 AAGTCTGTGA AGTAACACTA TGTGCCAGCC TAATCACTCA TATATGACCT CAAGAGAACA CCAAATAAGC ATATTTCCAG 000240 000241 CAGGAAATGA CCAGTGCTTT GGTTAAGAAT GCACATTATA CTGCAGTTCT TTGGGGAATG AAGCCACCCT TGACTGAGGT 000320 000321 ATTATGCCAA CTCTCACCCT GTGAATCCAC TGACTGGGGA ACATTGTTTA AGAAAATCAC ATGGCTGTGC CAACAAGCAA 000400 000401 GGAGACACGG CACAGAAGAC AGAGGCAGAA GCAGCTTTAT TGAAAAACAG AGCATGAGTA GAACGACTTC AAATCCCATA 000480 000481 TGGCACCACA GTGAGAAGTA ACTTCCTCTG AGCTTCTTAG AGAATCCAAC AATGTCCTGC TTCCTTGGGG AGCTGCAGCC 000560 000561 ATGGGCACAT GGGAATAGGG CTTCCACCAA GAGTCCCGTC AGTCACAGCA ACAGGAGGTC TTCCTCAGAC AACTTTGATG 000640 000641 ATAGTGGTTG TTAGCCAGAG CAAGCTAGAA CCAGAAAGAA AAACTATGAA GATGCCACAG TGGGAGTCTG AGCACCTTGA 000720 000721 GGCCTCCTGT TGGAAACTGG CAAACCTAAC TGTGGGACAC TTGGATGCTG AGTTCTGGTA AACATGCTGT CGGAGGCACG 000800 000801 GTAATTTAGT CATTAACATT TAAAAACGAT CTAATTCTAT ATACATACTC TGTTGAAGAC TTCTTCCAAC CACCTTGTAT 000880 000881 TATAAATTTA AAATATGAAA TACAAACTCT TTATGTGTCT TGACTCAGAT TACCTAGGAA GGGACAGTGA CCTATTCATC 000960 000961 AATGTTTAGA ATTAGAGTAA GTTATAGAAT ATAGTCTGAG AAAATTACTT GGACCAAGAA AGCAATGTCC CTGACATTCA 001040 001041 TCAATCTAGA ACCAGAGCTG CAGATTAAGC TAGGTGCAAA TTTATCAGAA AACAATATTT TTCCCAAATA CATATTGCAG 001120 001121 CCATAAAATG CCCTAAAAAC CCAGTTCTTA GAGGGACTAT TGCTTACTTA CTGAGAAATT GTATTCTCTG AAATCATAGA 001200 001201 CTATGAGATG CATTGCTGTT TAAAATTATT GCAATAAGAA TGAAACATCT CACTCTTATC TGGAGGAGTT AAGTCATTGT 001280 001281 GATCAGTGAA GCCTTGATTT AAGCTCCTGT GCAAAGCTTC AGAGAATGGG TCTCAGGACA CAACATTTGA CATCTATTTT 001360 001361 GACTTCATTT CCAAGAAAAT AGGACTGCTA TGGTTTGAAT GTTTGTCTCC CTCAAACCAA GGTGTCGGAG GTGGGGCCTA 001440 001441 ATGGGAGACG TTTGGGTTAT CAGGGAGGGT CCCTCATGAA TAGATTAATG CTCTCCCTGG GGGTAGGGAA CAGTTAGTGA 001520 001521 GTTCTTGCTT TATTCATTCT CAAGAGAGCT GGTTGTTAAA TAGAGCCTGG CGCCTCCCTC CTCCCTCCTT GCTTTCTCTC 001600 001601 TCACCGTATG ATCTTAGCAC ATTACACCTC CCCTCACCTT CTGCCATGAG TGGAAGCAGC CTGAGCCTCT CACCAGGAGC 001680 001681 AGATGCTGGT GCCATGCTTC TTGTACAGCC CACAGAGCAG TGAGCCAAAT AAACCTCTTT TCCTTAGAGA TTGCGCAGCC 001760 001761 TCAGATGTTC CTCTAGAGCA ACACAAAATG GACTAAGACA AGAACCATAG GTCCATTTCA CAGTACAGAG CTGAGGTTGA 001840 001841 CCCCTTTTAT ACACAACCAT ACTTTCTTAG AGCCCATAGA ATATCATTTC ATTTACATCA CACCTAAATT CCACTCTTTA 001920 001921 GCAAAATCTT ATGTTAACCC TATATTTTCC TTTGTTTGAT GAGATACCCC ACAATTGCTC TGTTGTGCAG TCCCCACACT 002000 002001 GCAATGAGTC AGTAAACTCA ATTGGTTTGT TTACAGGTTG TCCCTGGTGG TTTTAGGCTG ATTGGGCTAA GACAAACCAC 002080 002081 ATCTTATTTT TTAAATGTCT CCTTTAAGCA AATGTTATTA TCTGTATTTT ACTCTATTCC ATAAGCAGAA GTGACAAAGT 002160 002161 AGTCTAATTT TACCAAAAGA TGCTTATAGC ATAAAACTTT CTATGCTGTA AACATAGAAA GTACTTG |
Predicted Small Protein
Name | ENST00000505532.1_smProtein_1682:1795 |
Length | 38 |
Molecular weight | 4207.8257 |
Aromaticity | 0.0810810810811 |
Instability index | 92.6594594595 |
Isoelectric point | 4.95281982422 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0394049511698 |
Amino acid sequence | MLVPCFLYSPQSSEPNKPLFLRDCAASDVPLEQHKMD |
Secondary structure | LLLEEELLLLLLLLLLLLLLHHHHHLLLLLHHHHLLL |
PRMN | - |
PiMo | - |