ENST00000505532.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000505532.1

Source

Gencode19

Same with

lnc-TMEM144-1:3,NONHSAT098986

Classification

antisense

Length

2227 nt

Genomic location

chr4+:159092525..159122065

Exon number

5

Exons

159092525..159092632,159098064..159098198,159100813..159100887,159119940..159120022,159120240..159122065

Genome context

Sequence
000001 CATTTCTCTG CCGCATCCAC ATGTTGAACG GAGTTTAAAG TCTGCAGTTG GCTCCTGCTA ATGTGATGCA TGGTTTCCTG 000080
000081 ACTTCAGCTG CCGCGTCCGC TTCGGGATTA GGAAAAGTGC TTTTGGAGAA AATCACCTGT CTCCTCAGAA CTGGTCTTAC 000160
000161 AAGTCTGTGA AGTAACACTA TGTGCCAGCC TAATCACTCA TATATGACCT CAAGAGAACA CCAAATAAGC ATATTTCCAG 000240
000241 CAGGAAATGA CCAGTGCTTT GGTTAAGAAT GCACATTATA CTGCAGTTCT TTGGGGAATG AAGCCACCCT TGACTGAGGT 000320
000321 ATTATGCCAA CTCTCACCCT GTGAATCCAC TGACTGGGGA ACATTGTTTA AGAAAATCAC ATGGCTGTGC CAACAAGCAA 000400
000401 GGAGACACGG CACAGAAGAC AGAGGCAGAA GCAGCTTTAT TGAAAAACAG AGCATGAGTA GAACGACTTC AAATCCCATA 000480
000481 TGGCACCACA GTGAGAAGTA ACTTCCTCTG AGCTTCTTAG AGAATCCAAC AATGTCCTGC TTCCTTGGGG AGCTGCAGCC 000560
000561 ATGGGCACAT GGGAATAGGG CTTCCACCAA GAGTCCCGTC AGTCACAGCA ACAGGAGGTC TTCCTCAGAC AACTTTGATG 000640
000641 ATAGTGGTTG TTAGCCAGAG CAAGCTAGAA CCAGAAAGAA AAACTATGAA GATGCCACAG TGGGAGTCTG AGCACCTTGA 000720
000721 GGCCTCCTGT TGGAAACTGG CAAACCTAAC TGTGGGACAC TTGGATGCTG AGTTCTGGTA AACATGCTGT CGGAGGCACG 000800
000801 GTAATTTAGT CATTAACATT TAAAAACGAT CTAATTCTAT ATACATACTC TGTTGAAGAC TTCTTCCAAC CACCTTGTAT 000880
000881 TATAAATTTA AAATATGAAA TACAAACTCT TTATGTGTCT TGACTCAGAT TACCTAGGAA GGGACAGTGA CCTATTCATC 000960
000961 AATGTTTAGA ATTAGAGTAA GTTATAGAAT ATAGTCTGAG AAAATTACTT GGACCAAGAA AGCAATGTCC CTGACATTCA 001040
001041 TCAATCTAGA ACCAGAGCTG CAGATTAAGC TAGGTGCAAA TTTATCAGAA AACAATATTT TTCCCAAATA CATATTGCAG 001120
001121 CCATAAAATG CCCTAAAAAC CCAGTTCTTA GAGGGACTAT TGCTTACTTA CTGAGAAATT GTATTCTCTG AAATCATAGA 001200
001201 CTATGAGATG CATTGCTGTT TAAAATTATT GCAATAAGAA TGAAACATCT CACTCTTATC TGGAGGAGTT AAGTCATTGT 001280
001281 GATCAGTGAA GCCTTGATTT AAGCTCCTGT GCAAAGCTTC AGAGAATGGG TCTCAGGACA CAACATTTGA CATCTATTTT 001360
001361 GACTTCATTT CCAAGAAAAT AGGACTGCTA TGGTTTGAAT GTTTGTCTCC CTCAAACCAA GGTGTCGGAG GTGGGGCCTA 001440
001441 ATGGGAGACG TTTGGGTTAT CAGGGAGGGT CCCTCATGAA TAGATTAATG CTCTCCCTGG GGGTAGGGAA CAGTTAGTGA 001520
001521 GTTCTTGCTT TATTCATTCT CAAGAGAGCT GGTTGTTAAA TAGAGCCTGG CGCCTCCCTC CTCCCTCCTT GCTTTCTCTC 001600
001601 TCACCGTATG ATCTTAGCAC ATTACACCTC CCCTCACCTT CTGCCATGAG TGGAAGCAGC CTGAGCCTCT CACCAGGAGC 001680
001681 AGATGCTGGT GCCATGCTTC TTGTACAGCC CACAGAGCAG TGAGCCAAAT AAACCTCTTT TCCTTAGAGA TTGCGCAGCC 001760
001761 TCAGATGTTC CTCTAGAGCA ACACAAAATG GACTAAGACA AGAACCATAG GTCCATTTCA CAGTACAGAG CTGAGGTTGA 001840
001841 CCCCTTTTAT ACACAACCAT ACTTTCTTAG AGCCCATAGA ATATCATTTC ATTTACATCA CACCTAAATT CCACTCTTTA 001920
001921 GCAAAATCTT ATGTTAACCC TATATTTTCC TTTGTTTGAT GAGATACCCC ACAATTGCTC TGTTGTGCAG TCCCCACACT 002000
002001 GCAATGAGTC AGTAAACTCA ATTGGTTTGT TTACAGGTTG TCCCTGGTGG TTTTAGGCTG ATTGGGCTAA GACAAACCAC 002080
002081 ATCTTATTTT TTAAATGTCT CCTTTAAGCA AATGTTATTA TCTGTATTTT ACTCTATTCC ATAAGCAGAA GTGACAAAGT 002160
002161 AGTCTAATTT TACCAAAAGA TGCTTATAGC ATAAAACTTT CTATGCTGTA AACATAGAAA GTACTTG
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Predicted Small Protein

Name ENST00000505532.1_smProtein_1682:1795
Length 38
Molecular weight 4207.8257
Aromaticity 0.0810810810811
Instability index 92.6594594595
Isoelectric point 4.95281982422
Runs 7
Runs residual 0.009422266303
Runs probability 0.0394049511698
Amino acid sequence MLVPCFLYSPQSSEPNKPLFLRDCAASDVPLEQHKMD
Secondary structure LLLEEELLLLLLLLLLLLLLHHHHHLLLLLHHHHLLL
PRMN -
PiMo -