ENST00000505364.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000505364.1

Source

Gencode19

Same with

lnc-C4orf42-1:6,NONHSAT094694

Classification

intergenic

Length

2423 nt

Genomic location

chr4+:1246779..1259951

Exon number

2

Exons

1246779..1248377,1259128..1259951

Genome context

Sequence
000001 ATCGCTGAAA ACTGCCACAT AACTTGTATA ACTGCTGTAA GGCTTGGTTT TCAGCCATAA GATGGGAAGA GAAGTAACAT 000080
000081 CTACCTTGCA GGATGACTGC AAGCTGTAAA ATGCCACAAA GCGCAGGGGA GCCCAGAACC GCCGCAGCAG GACAGGTCCT 000160
000161 CTGGAAGCAG ACAGACCTGC CTTGTTACTT TAGCCATCCA GAGTCCAGTT TAGCCAGTGA TGAAATGAGT ACAAAAGAAC 000240
000241 ACCTTTCTTG TAGGATTGCA AAATGATGTC TTCATCCATT CTGTGCTGCT ATAGCAGACT CCTGCACACT GGGTAACTGA 000320
000321 CAGCTTACAG AAGCTTGTTG GCTTATGGTT CTGGAGGCTG GGAAGTCCAA CCTCAAGGGG CTGCATCTGG TGAGGGCTTT 000400
000401 CTTGTTGCAT CATCACATCG CAGAATAGCA GAAGGGCAAG GAGAGAGAGA GAAAAGAGTG CTGAACCCAC CCTTTGATAA 000480
000481 GAAGCCCACT CCCATGATAA TAGCACCAGC CCATTCAGGA GGGCAAAGCC CTCGTGGCTG CATCGCCTCT CAAAGGTTCC 000560
000561 ACCTCTCAAG ATCATCACAA TGACAATCAA ACTTCATGAA TTTTGGAGGG GACAATTATT CAAACCAGAA CAGAGGGGGA 000640
000641 TGGCAAATGT TCTGAAAACA AGCCTAGAAA TTGATCTTAG AAATGGTGCA AAAGTAGATT TCCCCTTCTG TCTTTACCTG 000720
000721 TGATGGTCTA ACCCCAAAAG CCTCCCAGAA CAGAACTTGT GAGCACAAGA TAGAAACAAC AAACTTGATG CAGAGCTGAG 000800
000801 CTCACAAGGA GGTCAGGGAT GTGACAGGAA CCAGAGACAA ACAGAAGGCT GAAAACCAGG TCTTAAAGTG TGAGAGCCAA 000880
000881 AGGGCAGCAG CCCAGGAGAG TGTTCGTCTG GAGCCCCGGG GTTTAAGTCT CCACACTCAC ATGGGAAAGG AGACGAGGCC 000960
000961 TCCCTGGATC CACGTGAATC AGGAACTGGA ACAAGGGCAC TCAAAGGGCT ACGCCATCAG GAGAGATGTG AATGAGTGTG 001040
001041 CCCACAGGAA CAGGAAGACA ACAGGATGGT TCTGTGTTTG CCTGCCTGTT GTGGTTCTGT GAGACAGAAA CAGTTTTGAT 001120
001121 GACAATTGAT AATCAGGACT CAGAGCCTTG TTAGACTTCA GGTATTGAAT TTTTTTTTGA GACAGGGTCT AGCTGTGTTG 001200
001201 CCCAGGCTGG TCTTGAACTC CTGGGCCCAA GTGATCCTCC TACCTTGGCC TCCCAAAGTG CTGGGATTAC AGGCATGAGC 001280
001281 TACCGTGCCC AGCCTAGGTA TCGAATTTTC ACAGGTTTCA CAGTCCAGGC CCTACCACCC CTGCAGCAAA TAACTTGATA 001360
001361 TAAAACCTGG GCCCAGGCTA GTAATACCCT TGAAGCCCAT GACAGAAGCA GGCACAGTGA TAGAAGCAAA ATCACGTAGA 001440
001441 CATTATCAAT CTAGCCCCCT CCAATTCCTA CCCATAAAGC CCACTGAAGA TGAATTTACA ATCATAAAGT ACAAAACATG 001520
001521 CCAAGAAAGA ACCACATGAG GGAAGTCAGC AGATGTGTGA ACAGCAGGAA CGGACTCCGC CACCAAAGGC CTTCAAAAGA 001600
001601 ACCAGCTGGA ACCCTCTGGA AAGTTCCAGA ACCACCAGCA TCAGGGTGGC CAAGACGTGG GCACTGCCAG ACAGGGGACC 001680
001681 ATGTGGGGCC AGAAGAAATT ATAGGACATA GCAGGTCTCA GACATGACCA GAGACTGCTG CCAGTGGTGG AAGGCTTCCC 001760
001761 TGAGCGTGAT GACCTGGCCA CTCCACAGGA AGCCTCCACA CCCAAGGTTA AAGGTGTCCA GCTGCGGCCA GGGTTCCGGG 001840
001841 GTACCTGTGG ATCCCGTGAC GTGGCACCGA AGATCTGAGC TGTGCAGAGG AGCTGCACCA CAGAGGCCAG GTTTCCGTGT 001920
001921 GGAGAACGCG CATAATGGGA GGCCTTGAGC TGAGACCCAG CCCCCGACCC CCACCCCCAC CCACCAGCAG GGGATTCTCC 002000
002001 TCAGGGCCTC ACAGAGCACC ACGTGGTGTC ATTGCTGGTC CTGCCATAGC TCCCAGGACC AATGCTTCCC AGAACTCCCT 002080
002081 GCTACATAAA TACATCCGGT CCCTTTCCCT CGAGATCTTG AAAAGTGAAG ACTTCACTTG GCAGTAACGG TAAAACATTT 002160
002161 CAACATGGTA AGTTGTCATT TTATGCACAC ATGGAATGGT GGCCCATAAA GGGCCTGGGG GTCCAATATC CTACATACTG 002240
002241 GACTCCTCAT TAGTCCTCTG AGTCTTCTGT TCCCCAACAC ACTGCATTGG GATCAAACTG AATTTGCAGC CAGGCATCAT 002320
002321 AGCTCATGCC TGTAATTCCA GCACTTTGGG AGGCTGAGAT AGAGGATCAC TTGAGGCCAG GAGTCCAAGA CCAGCCTGGG 002400
002401 GAACATAACG AGACCTTGCC TCT
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Predicted Small Protein

Name ENST00000505364.1_smProtein_1934:2146
Length 71
Molecular weight 7600.5946
Aromaticity 0.0571428571429
Instability index 64.8414285714
Isoelectric point 11.2916870117
Runs 9
Runs residual 0.0162659123055
Runs probability 0.037939900685
Amino acid sequence MGGLELRPSPRPPPPPTSRGFSSGPHRAPRGVIAGPAIAPRTNASQNSLLHKYIRSLSLE
ILKSEDFTWQ
Secondary structure LLLEEELLLLLLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLHHHHHHHHHHHLLHH
HLLLLLLLLL
PRMN -
PiMo -