ENST00000505109.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000505109.1 |
Source |
Gencode19 |
Same with |
lnc-POLR3G-3:1,NONHSAT102718 |
Classification |
intergenic |
Length |
584 nt |
Genomic location |
chr5+:89196481..89200725 |
Exon number |
2 |
Exons |
89196481..89197018,89200680..89200725 |
Genome context |
|
Sequence |
000001 ACTTGGAAAT AAAAGATCAT GAGAATAAAG TGGACAACTT TTAAAAGGTT TATGAGGGCT TTACATAATT GTTGTTTGTT 000080
000081 TTTTTTTTTT TTGAGATGGA GTTTTGCTCG TTACCCAAGC TGGAGTGCAA TGGCGCAATC TTGGCCCACT GCAACCTCCA 000160 000161 CCTCCTGGGT TCAAGTGATT CTCCTGCCTG AGCCTCCCGA GTAGCTGGGA TTACAGGCAC GTGCCACCAC ACCTGACTAA 000240 000241 TTTTGTGTAT TTTTAGTAGA GACGGTGTTT CACCATTTTG GTCAGGCTGG TCTTGAACTC CTAACCGCAG GTGATCCACC 000320 000321 CACCTTGGCC TCCCAAAGTG CTGGGATTAT GGGTGTGAGC CACCACGCCT GGCCTACATA ATTATTTTAA TGAACCTCTC 000400 000401 AGTTCATCAC ATTAATGCAG GGTCTGTCAT AGAAAACATT TTTTCTAATT CTTGAAACTG AAGTTTGTAT AATTCCAACC 000480 000481 AGTGTGGAAA TCTATCTTGC GATAACCAGA AATATTCCTC CACCATGAGG TCCAAAATAA AGTTGAAAGT AGCTGATATG 000560 000561 GGACCACAGA ATATTGGCCA ATCA |
Predicted Small Protein
Name | ENST00000505109.1_smProtein_95:190 |
Length | 32 |
Molecular weight | 3271.7644 |
Aromaticity | 0.0322580645161 |
Instability index | 56.0258064516 |
Isoelectric point | 5.26507568359 |
Runs | 7 |
Runs residual | 0.0245295698925 |
Runs probability | 0.0345092992151 |
Amino acid sequence | MEFCSLPKLECNGAILAHCNLHLLGSSDSPA |
Secondary structure | LLELLLLHHHLLHHHHHHHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |