ENST00000503969.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000503969.1 |
Source |
Gencode19 |
Same with |
lnc-AGGF1-3:1 |
Classification |
intergenic |
Length |
805 nt |
Genomic location |
chr5+:76382565..76443781 |
Exon number |
4 |
Exons |
76382565..76382729,76383312..76383444,76414145..76414346,76443477..76443781 |
Genome context |
|
Sequence |
000001 AAAGAACCCA CTGCAGGGCG TCCAGTCACT TGCCCAGTGA AAAGACTGTA ATCAGACAAC TTTAATAAAG GGAGAGCAGG 000080
000081 AGAGTGGTGA CGAATTTCCA CATTCCGAAC AAGCTTGTCG AAAGAGGAGT GCAGGGAAGG AGCAAGAATG AGGCACTGGA 000160 000161 AGACGGCTGT AGGCGCATGA TGTCACAAGT TATTGGAAGA AATCCCTCCA ACCTAGGTTG GGACAGATGA AGGCGGCGCT 000240 000241 TATTGGTGTT CACCAAAACA CCAGCATGGT GTACCAGCTT TGGCTAGATG ATGCTCAGGA AAACACAGAT CCTGGTGCCG 000320 000321 AACATGAGGA CAGGGCAGGC CGAAGGAGAA AGTGGAAGGA GGGGAGCTTC TCTCTCAGCC TCATCCTTCT GGGCCTGGAT 000400 000401 GCTGGAGAGT CATGAGGTGC TTCAGAGTAC TCTGGGTGAG GAGGGAAAGA TGGTGCCCAC CACATGGAGG CCAGCCTAGG 000480 000481 TCTTGTATGA AACCTGTGAG GAGATTCTCT CTCCCTTGCT GTCTTTGAAA AAGCAAGTTG CCATGTGAAG AGGGCCATAT 000560 000561 AGCATAGGAG CTGAAGGCAG CCTCCAACTG ACGGCAAGAA AATGAGGTCC TCAGTCTGAC AACCTGCAAG AAACTGAATG 000640 000641 TTCTAAAAGC CACATGAGCT TGGGAGCAGA TCTGACCCCA GCCAAATCTC TGAAGTCCGC AGGCAGGAAA TGAAGATCAG 000720 000721 AAAAAGGCTA TTGTCTCATG AATATGAGCC AGACTCCACA GAAGCTGGAG TCCTTCATTA TGGAGCTAAA CACATACACC 000800 000801 TGGCT |
Predicted Small Protein
Name | ENST00000503969.1_smProtein_287:478 |
Length | 64 |
Molecular weight | 7020.9851 |
Aromaticity | 0.0634920634921 |
Instability index | 57.2984126984 |
Isoelectric point | 8.36383056641 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.017589017589 |
Amino acid sequence | MMLRKTQILVPNMRTGQAEGESGRRGASLSASSFWAWMLESHEVLQSTLGEEGKMVPTTW RPA |
Secondary structure | LLLLEEEEEELLLLLLLLLLLLLLLLLEELHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLL |
PRMN | - |
PiMo | - |