ENST00000503066.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000503066.1 |
Source |
Gencode19 |
Same with |
lnc-ANAPC10-1:3,NONHSAT098600 |
Classification |
intergenic |
Length |
897 nt |
Genomic location |
chr4-:145564376..145567064 |
Exon number |
3 |
Exons |
145564376..145564886,145566440..145566619,145566859..145567064 |
Genome context |
|
Sequence |
000001 AGGGTGCTGA ACCCCGCGCG CCCGCCTCGC CGCGGCCCCC GGGTGGGGGC GTCCACGGCC CGGGTTCCCG GCGGGCTTGG 000080
000081 GGCAGGGACG CAGTCCGGAG ATTCCGGGAC TGCCCGGCTG CTGCAGCCCG CAGGCTCCTC TCTCCTCCCC GCTTCCCCTC 000160 000161 CGCACTGCCT GGGCTAAAGG CGGCCAAGCT GAGGCTCCGA AAGAAAAGGC AGGGGGACAT CCCAGATGCC GTTGAGTAGG 000240 000241 CTGAGATGGT TTGGAGACTC ATCCTCGCCG GAGGTCCTGC AAGCCACTGA AGTGGCACAG ACGCGTGTGC GCGGAGTGGG 000320 000321 GCGGTGTGTC GGGCCACAGG CCAAGCCCAA GTCGGCCTCC CAGAGTGTTT GCCACGGTTT GGGCGGAGGG AAAATTGCAA 000400 000401 CCCTTGCCTA CAACCAGACT GACAGCATAA TTTCTTAGGA ATCAAGAATC AATACAGGGT TATTTCTTTA GATTAAACCT 000480 000481 TAAAAGCCCC CTTGGAGGCT GAAGAAGCAG AGGATAGCCA TGCATACACT TGAACGTGAA AAATGGTCCT CTTTCATTGG 000560 000561 AGAGGTCTTC CTCTTCAGCT AAACCGACAG AGTGGTGAAA AGAAGAAGGG ACCCCTTGTT GACCAAAATA ATCCAGACAA 000640 000641 ATCAAATCGG CCCTTTCCAG CAAGGAGTGG AACAGCCCAA GGGTGGCTAG ATCACATCTT CTGCTCACAC CACCACTGAG 000720 000721 CAACCCTCTC CAGGACTGCC ACCTATGCAT AGGTCATGCC CTGTGCAAGA GCACATAAAG TGGGAGCTGA AGTCCTGCCC 000800 000801 AGGCTCCATT CACCAAGCAG AGCTTATGTT GTTGTGTGTC TGTGTCTACC CAGAGGATGT GGGTCCTTTT TAAAATGTGC 000880 000881 ACCAATGCAT CTTGTAT |
Predicted Small Protein
Name | ENST00000503066.1_smProtein_542:718 |
Length | 59 |
Molecular weight | 6685.4939 |
Aromaticity | 0.0862068965517 |
Instability index | 50.3155172414 |
Isoelectric point | 10.0204467773 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.04485578015 |
Amino acid sequence | MVLFHWRGLPLQLNRQSGEKKKGPLVDQNNPDKSNRPFPARSGTAQGWLDHIFCSHHH |
Secondary structure | LEEEEELLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |