ENST00000503048.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000503048.1 |
Source |
Gencode19 |
Same with |
lnc-NMUR2-1:1,NONHSAT104656 |
Classification |
intergenic |
Length |
596 nt |
Genomic location |
chr5-:152000065..152603103 |
Exon number |
4 |
Exons |
152000065..152000342,152064221..152064345,152448272..152448373,152603013..152603103 |
Genome context |
|
Sequence |
000001 AAATGAACAT AGAGGAGAGG AGATCCACGG GTGGCAGAAA GCTTATCAGA ATTGGATGAA AAGCCCAGAC CCACAGGAAT 000080
000081 CAGCTAAGCA GGTGTGTCAG TCCTGGTTAC TGGAATATTG AATTGTGACT GATTGATTTT GCTGTGAAGA TTCTATGAAG 000160 000161 AGAATACCAA TTGGATGACT GTATTGTTCT TCTATGGTAG TCTGAAAGGG ACAGAATGAG AGAGGGAGCT GGAGAAAGAA 000240 000241 ATGAATAAAC ACGAATGCAT CTGGAGAATG AGGCATCTTG GAATCTGGAA AGTGAGGCAT CCTGGAAGAG AGATGAAGGT 000320 000321 TCAAGCTCCA AGATGTCCAG AACCAAACGC GAAGAAGAAT TAATGAAATG GATATATGCA AAACTCGTCA AGATTCTCAT 000400 000401 TTGGCTACAG CAAATTATTT GGCGAGTTGA AAGTTTAGTT GTGTTAATGA TATGCTACAC CTTCTATACC TGTAATGTGC 000480 000481 CAAAAATAAC TGAACACTTT AGATTTCTCT TTAAATCCAG TAATAATCCA TTAAAGAGAT AAAGGTGCCA ATGTGCAGGC 000560 000561 AAGTAAACCA CATTGCCAAG TATACAAGCT AATACA |
Predicted Small Protein
Name | ENST00000503048.1_smProtein_254:541 |
Length | 96 |
Molecular weight | 11515.3299 |
Aromaticity | 0.126315789474 |
Instability index | 67.2569473684 |
Isoelectric point | 9.22918701172 |
Runs | 6 |
Runs residual | 0.0658930791546 |
Runs probability | 0.0441618088677 |
Amino acid sequence | MHLENEASWNLESEASWKRDEGSSSKMSRTKREEELMKWIYAKLVKILIWLQQIIWRVES LVVLMICYTFYTCNVPKITEHFRFLFKSSNNPLKR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHEEEEEEEEEELLLLHHHHHHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHH HHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTT TTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiii |