ENST00000501834.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000501834.1 |
Source |
Gencode19 |
Same with |
lnc-CLK4-1:1,NONHSAT105534 |
Classification |
intronic(S) |
Length |
1458 nt |
Genomic location |
chr5-:177865682..177870095 |
Exon number |
2 |
Exons |
177865682..177866970,177869927..177870095 |
Genome context |
|
Sequence |
000001 CAGGCCACAG AGCTCAAATG AAGGCAGTGG GACAGCGAGA CCCCACTGGG ACCACACAGA TGCACAAGCT GCTTCAAACC 000080
000081 TTTCAGGGCC CTTAAATTCC CAGCAACTAA AAGGAAACAG GCCGCCTGGG GTGCTGGAAA CCGCCGGCCT GGAGTCAGCC 000160 000161 GAAGGTTCGA TTTGTCCTTT CTAGAAACCG TGTACACATG GACTCCTACA ATCCAGTCCT TTGTGTCTGG CTTCTGTCAC 000240 000241 TCAGCGTCGC ATTTCTGGGG CTCATCCATG TTGTAGCATG TAGTGGTATT CCATTGATTG GCTACACTGT AGTTTCTCCA 000320 000321 TTTGCCAGAT GATGGATGCT TGGATTGTTT CCAGTTTGGG GCTATTTTGA AGAACGCTTC TATGAGCATT TGCATCTGAG 000400 000401 TTGTATGGAC GTATGTTTTC ATTTCTCCCG GGGAGATCCT AGGAGCGGAG TTGCTGCACT GCATGGTGAA CGTATGTTTA 000480 000481 ACTCTTTAAG AAACTGCCTC GCTGACTTCT GAAGCAGCTG CACCGTGGCG TGTTCCCACC AGCAGCTTAT CTCGTGTCTT 000560 000561 CACATCTGCT GGAGGATTTG AGCAGAGGAG AGATGTGATG AGACTTGCTC TTCAGAAGAT TCCTCCAGCT GCCGGGTGAG 000640 000641 GGTCACTGAG AGGGAAAGGA AGAGGCAGGA GGGAGAAGTC TGGGTCCTAG GCTAAAGCTC CGGCTCTGGG TGGACCAGAG 000720 000721 ACAAGGAGCT GGAGTCCAGG GATGTGTTCA ACAGGGTCTG GCATGGAAGG AGCAGGAGCC ACAGAGACTT TGGTAACTGG 000800 000801 CTCAGCCTCA ATCAGCAAGT GGCTGAGAGA GAAAAGATGG AGGTGACTTG GGAGCAAGAC TTCCATCTGG ACTGCGATGA 000880 000881 TGGTGCCGGG GCCTCTGGCT CTTGCCTGTC CATGCATCAT GCATGGCCAG ATCAGCAGTC ACATCCCTTC AGAAGGTTCC 000960 000961 CACATCCTGT AAGGGGAGTG GCTCCCAGTC CTGGCTGCCC TTTTGAATCA CCTGGAAAAC TTTAAAATCT GCTGGCTGGG 001040 001041 TCCTGATGTA ACTGATCTGC GCACAGCCTG GGCATGGAGA GGTTCAAGCT CCCAGGTGAT TTGAATGCAC ACTGGGCTGA 001120 001121 GTCAAGCTCT CAGGCGCAGG TGCACACTGG GAGCTCCAGG GGAGTTTTAC AAACTACTAA AGTGCTGAGT CCCACCCAGA 001200 001201 GCTTTTGGTG CAGTTGGGAC AGGGGGAAGC CTGTGCACTA GGAGTTGTAA CCTTTCCCCG GGTGATTATA ACGCGCAGCC 001280 001281 ACGTTTGGGG ACTGCTGCTT GAAGGCAACT TGTTTGGACC CAAGAGTCAG TTCTGAGCAG ATGCTTCTAA TGCTAGCATT 001360 001361 TCCTAAAAGA GTGTTCTTGA TTCTCTCGCT CTTTATAAGT AGACCCAGAA ATCTTTTTTT TTTCCTTCTC AATGTACAGA 001440 001441 TTATTTTTCT GAAGCATT |
Predicted Small Protein
Name | ENST00000501834.1_smProtein_836:1024 |
Length | 63 |
Molecular weight | 6844.518 |
Aromaticity | 0.0967741935484 |
Instability index | 81.2177419355 |
Isoelectric point | 5.54815673828 |
Runs | 7 |
Runs residual | 0.0407373271889 |
Runs probability | 0.0278345572464 |
Amino acid sequence | MEVTWEQDFHLDCDDGAGASGSCLSMHHAWPDQQSHPFRRFPHPVRGVAPSPGCPFESPG KL |
Secondary structure | LEEEEEELEEELLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LL |
PRMN | - |
PiMo | - |