ENST00000501834.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000501834.1

Source

Gencode19

Same with

lnc-CLK4-1:1,NONHSAT105534

Classification

intronic(S)

Length

1458 nt

Genomic location

chr5-:177865682..177870095

Exon number

2

Exons

177865682..177866970,177869927..177870095

Genome context

Sequence
000001 CAGGCCACAG AGCTCAAATG AAGGCAGTGG GACAGCGAGA CCCCACTGGG ACCACACAGA TGCACAAGCT GCTTCAAACC 000080
000081 TTTCAGGGCC CTTAAATTCC CAGCAACTAA AAGGAAACAG GCCGCCTGGG GTGCTGGAAA CCGCCGGCCT GGAGTCAGCC 000160
000161 GAAGGTTCGA TTTGTCCTTT CTAGAAACCG TGTACACATG GACTCCTACA ATCCAGTCCT TTGTGTCTGG CTTCTGTCAC 000240
000241 TCAGCGTCGC ATTTCTGGGG CTCATCCATG TTGTAGCATG TAGTGGTATT CCATTGATTG GCTACACTGT AGTTTCTCCA 000320
000321 TTTGCCAGAT GATGGATGCT TGGATTGTTT CCAGTTTGGG GCTATTTTGA AGAACGCTTC TATGAGCATT TGCATCTGAG 000400
000401 TTGTATGGAC GTATGTTTTC ATTTCTCCCG GGGAGATCCT AGGAGCGGAG TTGCTGCACT GCATGGTGAA CGTATGTTTA 000480
000481 ACTCTTTAAG AAACTGCCTC GCTGACTTCT GAAGCAGCTG CACCGTGGCG TGTTCCCACC AGCAGCTTAT CTCGTGTCTT 000560
000561 CACATCTGCT GGAGGATTTG AGCAGAGGAG AGATGTGATG AGACTTGCTC TTCAGAAGAT TCCTCCAGCT GCCGGGTGAG 000640
000641 GGTCACTGAG AGGGAAAGGA AGAGGCAGGA GGGAGAAGTC TGGGTCCTAG GCTAAAGCTC CGGCTCTGGG TGGACCAGAG 000720
000721 ACAAGGAGCT GGAGTCCAGG GATGTGTTCA ACAGGGTCTG GCATGGAAGG AGCAGGAGCC ACAGAGACTT TGGTAACTGG 000800
000801 CTCAGCCTCA ATCAGCAAGT GGCTGAGAGA GAAAAGATGG AGGTGACTTG GGAGCAAGAC TTCCATCTGG ACTGCGATGA 000880
000881 TGGTGCCGGG GCCTCTGGCT CTTGCCTGTC CATGCATCAT GCATGGCCAG ATCAGCAGTC ACATCCCTTC AGAAGGTTCC 000960
000961 CACATCCTGT AAGGGGAGTG GCTCCCAGTC CTGGCTGCCC TTTTGAATCA CCTGGAAAAC TTTAAAATCT GCTGGCTGGG 001040
001041 TCCTGATGTA ACTGATCTGC GCACAGCCTG GGCATGGAGA GGTTCAAGCT CCCAGGTGAT TTGAATGCAC ACTGGGCTGA 001120
001121 GTCAAGCTCT CAGGCGCAGG TGCACACTGG GAGCTCCAGG GGAGTTTTAC AAACTACTAA AGTGCTGAGT CCCACCCAGA 001200
001201 GCTTTTGGTG CAGTTGGGAC AGGGGGAAGC CTGTGCACTA GGAGTTGTAA CCTTTCCCCG GGTGATTATA ACGCGCAGCC 001280
001281 ACGTTTGGGG ACTGCTGCTT GAAGGCAACT TGTTTGGACC CAAGAGTCAG TTCTGAGCAG ATGCTTCTAA TGCTAGCATT 001360
001361 TCCTAAAAGA GTGTTCTTGA TTCTCTCGCT CTTTATAAGT AGACCCAGAA ATCTTTTTTT TTTCCTTCTC AATGTACAGA 001440
001441 TTATTTTTCT GAAGCATT
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Predicted Small Protein

Name ENST00000501834.1_smProtein_836:1024
Length 63
Molecular weight 6844.518
Aromaticity 0.0967741935484
Instability index 81.2177419355
Isoelectric point 5.54815673828
Runs 7
Runs residual 0.0407373271889
Runs probability 0.0278345572464
Amino acid sequence MEVTWEQDFHLDCDDGAGASGSCLSMHHAWPDQQSHPFRRFPHPVRGVAPSPGCPFESPG
KL
Secondary structure LEEEEEELEEELLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LL
PRMN -
PiMo -