ENST00000501825.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000501825.2 |
Source |
Gencode19 |
Same with |
lnc-FRG2-2:2 |
Classification |
intergenic |
Length |
841 nt |
Genomic location |
chr4-:190785417..190860992 |
Exon number |
3 |
Exons |
190785417..190785941,190858352..190858488,190860814..190860992 |
Genome context |
|
Sequence |
000001 CTTACCGCTA TCAACGTATT TTCTGGTGTT TTCACAGTGC TGCGCTTCCT AATCCCCATT CCATGGCAAT CCACATGCCA 000080
000081 TGATGCCCGG AGTCATTAAC AAAGGAGACA CACAGGGGCT CCTCACGTTG GCTTTCCAGG GTTTTGATGA AAATCTGTTT 000160 000161 CCTCGTCTCA TACAATGTGG CTGTACAGGA AGCATGGTGA TGGCATCTGC ATGGCGCCTG TGGAGGCCCC AGGGAGCTTT 000240 000241 TACTCATGAT GGAAGGCACA GAGGGAGTAG GCACATCACA TGGTCCGAGG AGGAGCAAGA GAAAATGGGA GTGGGGCTCT 000320 000321 TTGTCCTGGG AAGAGTTTGC TGCATCTTCC AGTTTCAGTA ATCAAAGAAG CAAAGTTCCC TGCAGTTCTT CAAGGAACCT 000400 000401 TGAGAATTCA GAAGGTCTTG GGGTGGCTGC ATCCATCCTG CAGACAAATG CCAATCAGCA GAGGGGCCAT TCCCAGGGAC 000480 000481 ACATGTCTGG CTGACTTGGG CCTTGGCCAG GTAAGACACA CAGCATGCAT GCCTGCATTT CTGAATGCCA TAGACCTGAC 000560 000561 AAGTCATAAA ATAGCAACCA ATAATTTTAT GTTAGAGTGC TCCCTTCCTC ACAGAAATCT CAGCATATGT GAAGATAGGT 000640 000641 TGGAATGTGT AAAGAAAAGC TAAGAAAGCA GATTTCTGAT AAGAACAGCG TGTGACTTGT ACAGCAGCTC TGAATTACAG 000720 000721 CCCGTAGGAT GGAATGCTGA CAGTTCCTTC TTCCTTACCT GTGATGGCTA GAATTTTATT TAGCACATCG TTTTTGAGCC 000800 000801 AATCTCAAAA TGAGAAAACT TTTGAGGAAT TATGCATAGT G |
Predicted Small Protein
Name | ENST00000501825.2_smProtein_245:493 |
Length | 83 |
Molecular weight | 8895.5919 |
Aromaticity | 0.0609756097561 |
Instability index | 56.806097561 |
Isoelectric point | 9.18218994141 |
Runs | 9 |
Runs residual | 0.0261456023651 |
Runs probability | 0.0421499931304 |
Amino acid sequence | MMEGTEGVGTSHGPRRSKRKWEWGSLSWEEFAASSSFSNQRSKVPCSSSRNLENSEGLGV AASILQTNANQQRGHSQGHMSG |
Secondary structure | LLLLLLLLLLLLLLLLLLLLEEEELLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLH HHHHHHHLHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |