ENST00000500817.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000500817.2

Source

Gencode19

Same with

lnc-EGFLAM-2:2

Classification

antisense

Length

1342 nt

Genomic location

chr5+:38558932..38671318

Exon number

9

Exons

38558932..38559279,38595024..38595171,38641031..38641131,38644452..38644547,38646734..38646816,38647335..38647537,38653179..38653262,38653967..38654054,38671128..38671318

Genome context

Sequence
000001 ATAATCAAGT CATTTCTCTC CCTAACAAGT GAGGATTACA ATTCAAGATG AGGTTTGGGT AGGAACACAA AGCCTGACCC 000080
000081 TATCCCACAG CATGTCCAGG CTGCCCTAGC ACCACCCAAT AGAAGGGAAA ATGGCAGAGG GAAAGTCCTA GTGGAAAGAG 000160
000161 ACCTCAGTCT CAGCTAATTG TGGTGACAAT ATATTGCTTT TGCAAATTGT ACATAAACAT ATGACCAGGT GAATGTATCG 000240
000241 CCAAGGCTCC TGCCAAGGCC TGGGATGGAG GCCTAGAGAA GATGCCCGAA AGTTTATGCT GTGTGAGCTT CACAGAAGAC 000320
000321 CTGCCTTCCA TGTATACCCA TTTTACAGGT GTCTGTGCGG TGCAGAAACT GTACAACTGT ATACAGTGAC CATTTCTACT 000400
000401 CTGGGTCTCT AAACAAGGGC TGGTATCGTT ACAGAGACTG AAGACTGAGG AAGACCATCT CTGTAGGATG CCAAGGATTG 000480
000481 ACTGGAGAAA GTCTGGAATT TTCCACAAAT GAGTTCATTT ATAAAGAGAA AGGCAAGCTT TGATGACAAC ACCTTCACAA 000560
000561 AATGGAGGCC TTTGAAAACA TTGGTCTGGA TTGAGGAGTT GGAGAAGAAT GAAGTGCACA TCAACCAAAC AGAAGAGAAG 000640
000641 CAATTTGGAG GAGGAAAAAA TCAGTTCTTC ATGAAAGGAT CACATTGATC TTGGTTCATC CCAGTGCCTC CTCTGCAGAC 000720
000721 AATCTTGTCC TCAGTCTTTC AATTGTTTTC TTCCCATGCC CTGACAAGCG AACCAGATCA GGAATTTAGG AGCAGCTTAC 000800
000801 CTAATGGCAC CTGGTTACCT AATGGCACCC TCAACAGCTT ACCTAATGGC ACCCTCACTT GGTTCTGGCT CCGGGCCTCT 000880
000881 CACAAGATTG TACACATGAT GATGGCCAAG TTTGCAGTCA TCTGAAGTCT TGACTGGAGC TGGAGACTAC ATTTCCAAGA 000960
000961 TGGCTCACTC ATATTGCTAA AGCAATTACA GCTCACTGCA GCCTTGACCT CCCAGGCTCA AGCAAGCCTC CTGCCTCAGC 001040
001041 CTCCCAAGTA GTTGGGACTA CAGATCTTTT TCAATGCAGA AGCTTAAAGA AGACACTAAA AAATGTGTTT AAGATCTCTT 001120
001121 TAAACTGAAG TCTTCTGAAC AAGTGAAGCA GGTACATGCC TGGGAAGACA GCCAGGGAAC AGGCAGCTAC ATCAACCAAG 001200
001201 AAGGCTGACA ACATGTTCCA TCCCACAACT ATGTGGTAAT TGCAAAGATG AGAAAATAGC AGAGATCCTC CAGTCAGCCC 001280
001281 TGGAATGAGT TTAGGGGAGA GAAATCATGC AATCTCTTAG TAACATGGCA TCTGTAAATT CA
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Predicted Small Protein

Name ENST00000500817.2_smProtein_281:388
Length 36
Molecular weight 3959.5875
Aromaticity 0.114285714286
Instability index 48.2971428571
Isoelectric point 4.64923095703
Runs 7
Runs residual 0.0188861985472
Runs probability 0.0238726121079
Amino acid sequence MPESLCCVSFTEDLPSMYTHFTGVCAVQKLYNCIQ
Secondary structure LLLLEEEELLLLLLLLHHHHLHHHHHHHHHHHHLL
PRMN -
PiMo -