ENST00000499504.3
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000499504.3 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1223 nt |
Genomic location |
chr11+:86666661..86712001 |
Exon number |
3 |
Exons |
86666661..86666754,86669024..86669068,86710918..86712001 |
Genome context |
|
Sequence |
000001 TCTTGCTTTC CTCCCACCCG GATCTAGGCG CGCAGGGGCC AAGCAGGGAC GCAGCCCAGT GGCTCCAGCC ACGCCGTCCT 000080
000081 GCCCCCTTCT GCAGAAACTG ATGCTCTGAG AGGCCAAGCA GTTTGCCCAA GATTACACAG TCATAGCCGT GCCTGGGAGA 000160 000161 ACCTTCTCTT CAACTCTGCC GCACCACTGT CAAGCTCACC TTTCTTCTAA GGTTTTATTT TAGAGTTAAC ATCCTCCAAA 000240 000241 AAGCCTTCCT CAGGAGTTGA AGGTGCCCCT AATATCACAG CCATGGCATC CTGTACACTG GACCTTATTG TCTGTCTGCC 000320 000321 TGTTGTACCT TGTATGAGTC TATAAGCAAA ACCTATAAGA AGCCACATCT GGCTATTCTA TGTACTCAAA AAATAATTGG 000400 000401 CAAGTGAAAG AATGAGGAAA AGGAGAAAAA ATTCAGAAGG CCCCTACCCC TTCCAATGGG TCAAGTCAGG AATTTCCTAC 000480 000481 CTGCATGTGA TTCCCTGTGT CCTAGAGGGT TTTATTTACT CCTCAGACCT TGGAAACTGT TAACCAGAGT CTCTGTTTGG 000560 000561 AGATCTTATC TGTGTGCTTC TCCATGGGTG TTGTTTCCCT GTCTCTGCAG CCATGCATTC CTCAGCTCTT TAAGTGGTGG 000640 000641 AGCCTGTCTG CCTGGATAGA GTGCAAAAGC TACAGTGTAA TCTTGCTTTC TTTCAGGGCC ACTGACCAGA GGAAATAAAA 000720 000721 ACTGGACTGA TTGGGCTCTC CTGATGTAGA CCAGCCAGTG GCCCTCTAAG TTTCCTTCTA TGTTTAAAAT TCCTTATCTG 000800 000801 ACATTGCTAG CTGATCAGCA GGCCCACAGG TCAGCTGAGG GCTTATCTCC AGGGCTGGAG CTTCAAAGAG ATACATGCAC 000880 000881 ACGACTCCCC TGGGTCAGAT GGGCTGTGTC ACAGTGAGTT GGGGATAATT TGGGATCAGT CAACATAACA CACATAACAC 000960 000961 AACCCATTAA TTTTTTTTTT CAAAAAGCGA AGTTTATTTT ACTTTTTCCC ATTATGAAAG TCATCAATGC TCATTATAGA 001040 001041 AAATTTGGCA AATAACAAAA AGTGGAAAGA AAAAAATTCC TTAATAATTT AGTATATTTG ATATATTCAT CCTTAATCCT 001120 001121 TAATCTTTTA CTATGTTATA TCTTTAATAG TTGTGATGAT ATACTTTTTG TAATAAATAT ATATTTGTGT TGTGGCTTTT 001200 001201 TTAAAATTTA AAAACATAAC AAA |
Predicted Small Protein
Name | ENST00000499504.3_smProtein_455:658 |
Length | 68 |
Molecular weight | 7462.8537 |
Aromaticity | 0.134328358209 |
Instability index | 67.5807462687 |
Isoelectric point | 9.17816162109 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0386931048697 |
Amino acid sequence | MGQVRNFLPACDSLCPRGFYLLLRPWKLLTRVSVWRSYLCASPWVLFPCLCSHAFLSSLS GGACLPG |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEEELLHHHHHEEEEHHHEEELLLEEEELLLLLHHHHHLLL LLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLL LLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTooo ooooooo |