ENST00000487567.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000487567.1

Source

Gencode19

Same with

lnc-HEATR1-2:1,NONHSAT010405

Classification

intergenic

Length

1440 nt

Genomic location

chr1-:236686369..236687808

Exon number

1

Exons

236686369..236687808

Genome context

Sequence
000001 AGGGAACGCA ATGGAGGTCA CTCCACTGTC ACTACAAATT CCGGGAAGGA AACTTCCCCA GATTCCTCCA CTTGGAGGTG 000080
000081 GCGCTCGGCC TCAGGCTAGG AGGGAACAGG TGAGAAAGCA GCCCAGGTGG GGTGGGTTTG CAGCGAGGAG ACACCCCAGG 000160
000161 GCAAACAGCC TGACCCCAGC CAGGGATGTC CAAGAAAGGC CGCGACTCCT GATAATCCCT TATGCCCCGG AGCGCCTCGC 000240
000241 CTGCAGAGGC AGCGTCCCCG CCACCCAGCC CCGGCTCTGC CGCGGTGAGG ACCGGCGGGT CGGGGTGGAC TGGACACTGT 000320
000321 CCCACCCATC AAATGGTGAT TTAGGAGCCG TGACATCCGA ATGCCATCCT CCACTGGCGA GACCCTCAGA GCAGCCACGC 000400
000401 CTCTAGCGAC TGCCCCGCCA CCCGAGGCCG GGGGTCGCGC GACTCACCCA AAGACTGGTG TTTCAGGCGC TCCACGGAGC 000480
000481 AGGTTGTTTG TCAGCAGCTA AGTGCCGTCA GGGTTCCCGG CTCTGGCGTC CGTGGGCGGC TACGGGAAGC GACAGGAGTC 000560
000561 AGTCCTCGTT CACTTCCCGG CTCGCGCGCC TCACTGCTGT GGTCTCCCCA CCCTCCCCGC GCCCCGCCTT CTGTGTCTGG 000640
000641 GGCGTCCCTG GCGGCTCTGC TGGGTTTTGG ACAGGGACCC GCCGCTGATC GCCACCCAGC TCGGCCTCCT GCACAGCCTC 000720
000721 TGGAGCCTTG GACCGCGACT GGCTTGCTGT GGGACGAGCA CAGAGGGATA AGGACAAAGA ATGTGTCCTG GGTGGATCTG 000800
000801 GCTGCCTTTG CCCGGAAGGC GGAGTGGGGT GGGAGGTGGT AGGAAAATGG GAAGGAAAGA AAAGAAAGGT GGGCCGACGT 000880
000881 CCACCTGGCT GTTCCAGGCC TCCAGGTCTA GGAGGGAGGG CGCTCGGGGC TGGGACTTTT CAGGACCAGG GTGGTCACCG 000960
000961 CACAGGCCCC GCCTGCCTGG ACCAAGCGCT GGCCTTCCCG GGGCGCCCAG GTCCACGGGG TCAACGCCAG GGTTTTCTCA 001040
001041 GCTTCCTCGT CTGCCTCGGA TCCAAGTCCA GACAGTGCCA GAAGAGACTT GGAGGCGCTG CTTTTTGACA GTACACACCT 001120
001121 CTGTATGCAG GTGAAACGGT GGGGGAAGGG TTCAGTACGC TGGACTGTGC CCAGCCCAAG CTCCCCATCC GTTAGTGATA 001200
001201 ACTTGGACTC GCAGCCACTC CGCGTCACTC GCCAGTTATC CTGCGTGTGG GTGTTTTCTC CAAATTGGAC ACTTAGGGAA 001280
001281 CAGTTTAAGC AGTATGGAGC ACAATTCTGT GCCTATTAGA TGCTCTTAAA TACCCGACTT CTCAGGGCCC TACACTGACT 001360
001361 GATAGTTTGA CCTATTGGCT GTAAACACAC CAGCCAGAAA TACAAATAAA GTTAAACAAA GTCATGTCAG CCACTTGGAA 001440
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Predicted Small Protein

Name ENST00000487567.1_smProtein_1124:1318
Length 65
Molecular weight 7422.3596
Aromaticity 0.140625
Instability index 72.5703125
Isoelectric point 9.89178466797
Runs 11
Runs residual 0.02328125
Runs probability 0.0486261662733
Amino acid sequence MQVKRWGKGSVRWTVPSPSSPSVSDNLDSQPLRVTRQLSCVWVFSPNWTLREQFKQYGAQ
FCAY
Secondary structure LEEEELLLLLEEEEELLLLLLLLLLLLLLLLEEEEEEEEEEEEELLLLLHHHHHHHHLLE
EEEL
PRMN -
PiMo -