ENST00000484675.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000484675.1

Source

Gencode19

Same with

lnc-FILIP1L-1:1,NONHSAT090843

Classification

intergenic

Length

465 nt

Genomic location

chr3-:99226031..99245957

Exon number

2

Exons

99226031..99226430,99245893..99245957

Genome context

Sequence
000001 CCTGAAAAGG ACTAATATGG AAATCTCAGC TCATAGAGAC CCCTCCGGAA GTTCTTCACA TTACTGAGCG GTATTTATAC 000080
000081 CCCAGCAGGA CTTGCTTGAA TACAAGGAAC GCCATCTAAT GAAAATCCCA TGCCGCAGGC TGAGCTGGAG GGAGCATCGT 000160
000161 GAGTGGCTCA GACCCAGGCC TTCAAGGCAA GGGACAGACA CCGTCTTACT TGGTTTGCGG TGGAATATCT GGAAAAAGCA 000240
000241 TTGGTTACAT TTTTTGTAAC CCTTGGCTAA TGAGTCCCAG TCAGTGGAGG CTGAGCTAAA CACCACACAG GCAGCAGACC 000320
000321 ATCAGCTCGC TTCTCATGAA TGCAAAGAAG ATGTCATGGA ATCAGGTCTT ATCTTTTCAT GTAACCTGGC AGCTAATTTC 000400
000401 TCCCTTAATT AGTTGTAACA CCGTTTATGC AAAACAAAGG ATTTTCTTAT TTCCTTAAAC AAAAA
[back to top]

Predicted Small Protein

Name ENST00000484675.1_smProtein_335:457
Length 41
Molecular weight 4741.6013
Aromaticity 0.15
Instability index 54.0925
Isoelectric point 10.0326538086
Runs 6
Runs residual 0.0280241935484
Runs probability 0.0913413413412
Amino acid sequence MNAKKMSWNQVLSFHVTWQLISPLISCNTVYAKQRIFLFP
Secondary structure LLLLLLLHHHHHHHHHHHHHHLLLLLLLHHHHHHHEEELL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiii