ENST00000480826.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000480826.1

Source

Gencode19

Same with

lnc-TRAT1-1:1,NONHSAT091101

Classification

antisense

Length

564 nt

Genomic location

chr3+:108820303..108829189

Exon number

3

Exons

108820303..108820406,108828611..108828696,108828816..108829189

Genome context

Sequence
000001 GTTCTTCTTG TTGGCCTACC TGAATACATG CTGAAGAATT GTCCTGAGGA CCCTCTGTCA GTCTGGGTAC AGATATGCTA 000080
000081 TAGTTCAGTG GCACATGGTA TGAGGAGAGA GCTGCCTGCA GAGAGCGTGA GTCCTGATCC CTTGTCCCAG GGCAAAAGAG 000160
000161 TTTCAGAGGA AGCCCAACTC CACTGGGCGG TTTTTCAGGA CCTGGAGAGG AGAAGGAGAT GAAGAGTGTC ATTTATTGTT 000240
000241 TCCTCAGTTA TCTCAAGAGG TCCACGTCTA TCTCTCTCAT GAAGCGTAAG CACTCCTCTG ACTCAGAACA CTCAGTTAAC 000320
000321 TGAGGTGCTT TTTAAACAGA GATATGGATT TAGATCATGG AGCATATCCT CTCACCCGTG ACCAGTAGCC AATATTGCAG 000400
000401 AACAGCTGAC AGAAATGTGG TAGGGATGCT GCGTGACTAC CTGGGCATTA CTCTACAGAG CTGGATCACA GAACCTAACT 000480
000481 TCATTAGCAT CATAGTCTAA TGAGATAACT AGTGAGTGCA ATAAATACTT GATGACTACG AATAAAGTCA GCAAAGAAAA 000560
000561 CAGA
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Predicted Small Protein

Name ENST00000480826.1_smProtein_356:499
Length 48
Molecular weight 5369.1561
Aromaticity 0.0851063829787
Instability index 59.0382978723
Isoelectric point 5.46453857422
Runs 8
Runs residual 0.00393617021277
Runs probability 0.0361243596538
Amino acid sequence MEHILSPVTSSQYCRTADRNVVGMLRDYLGITLQSWITEPNFISIIV
Secondary structure LEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHEEEEEELLLEEEEEL
PRMN -
PiMo -