ENST00000473970.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000473970.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1297 nt |
Genomic location |
chr10+:104209588..104216054 |
Exon number |
3 |
Exons |
104209588..104209779,104209944..104210087,104215094..104216054 |
Genome context |
|
Sequence |
000001 TTTTTTGTAG AGACAGGGTT TCGCCATGTT GCCTAGGCTG GTCTCCAACC TGGTCTCCTG GGCTCAAGCG ATCCGCCCGC 000080
000081 CTCGGCCTCC CACAGTGCTG GGATTCCAGG CGTGAGCTAC CGCGCCCGGC CTATTTACTT TTCTTACTAA GCTGGGGATC 000160 000161 ACCGTCGCCC TCGGCTTGGC AGGAAGGCGG GGGTGCAAGA AGAAAAGAGG TACAGAACAC CCAGAGGTGC CCTCGATTCC 000240 000241 GTCTTGCACT TGCCCTTCTC CCACCGTCCA GCAATAAAGC GAGAGAAACA AGTGCAGGAA ACTGGCCGGC AGTCATGGGA 000320 000321 GAAGCCAAAA AGACAGGAGT TCAGTGGCAT GACCAGGGCT CACTGCAACC TTGATCTGGG CTCAAGTGAT CCTCCTACCT 000400 000401 CAGCTTCCTG AGTAGCTAGG ACCACAGGTG TGCACCAACC ACACCCGACT AATTTTTGTA GAGATGAGAT CCCACTATGT 000480 000481 TACCCAGGCT GGTCTTGAAC TCCTGGGCTC AGGTGATCAT CCTGCCTTGG CTTCCCAAAG TACTGGGATT ATAGGCTTGA 000560 000561 GCCACCGTGC CTGGCCTGTG ATCAGAATTC TCATTTTTTT AGTCACTAAA AATGCTGGGG GGCACTCCAT TCTCCATTAT 000640 000641 GTGATTAGTT CACATTGCAT GCTTGTATCA AAACATCATA TATACCCCAC AAATATATAC AAAAAACTTT AAAATTTTAA 000720 000721 GTATTAATTG CTCAGGAAAA AATTAAAATG CTGGGGTGCT GAAATCTCAA GGGCCCCATT ACAAAACTCC TTAGGAACCT 000800 000801 CGCCCTCTCT CTGCTGTAAG GACTGGTTCC AGAATGAGAG AATTTAAAAG ACATTCCCCC CCCAAAATGT TCATAATGTC 000880 000881 ACCCCGGAAA CCTGCGAATA TGTTATATTA CATGACCAGG GAGAAGTAAG GTTGCAGATG GCAGTAAGGT TGCTAATGGG 000960 000961 CTGACCTTAA GATAAGGAGA TGATCCTGGA TTATCTGGGT GGACCCAATG TAATCACAAG GGTCCTTAAC TGTGGAATAG 001040 001041 TGAGGTGGCT GAGTCAGAGG CAGAGTGATG CAATGACTGA AAGACTTAAC CAGCCATCAC CGGCTTTGAA TACGGAAGAC 001120 001121 GGTCATGAGC CAGGGAATGC AGGCAGGCTC TGGGAGCTGA AAAAAGCAAG AAAATGGATT CTCCCCTGGA GCCTCCAGAA 001200 001201 GGGATGCGGT CCTGCCAACC CCTTGTCAGT GAGCCATTTC AGATTTCTGA CTTCCAGGAC TGTAAGAAAA TAAACTTGTC 001280 001281 TTGTTTTCAG CCACCAA |
Predicted Small Protein
Name | ENST00000473970.2_smProtein_833:928 |
Length | 32 |
Molecular weight | 3902.7036 |
Aromaticity | 0.129032258065 |
Instability index | 96.9516129032 |
Isoelectric point | 10.6204223633 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0472354707648 |
Amino acid sequence | MREFKRHSPPKMFIMSPRKPANMLYYMTREK |
Secondary structure | LLLLLLLLLLLLEEELLLLHHHHHHHHHLLL |
PRMN | - |
PiMo | - |