ENST00000473970.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000473970.2

Source

Gencode19

Same with

,

Classification

intergenic

Length

1297 nt

Genomic location

chr10+:104209588..104216054

Exon number

3

Exons

104209588..104209779,104209944..104210087,104215094..104216054

Genome context

Sequence
000001 TTTTTTGTAG AGACAGGGTT TCGCCATGTT GCCTAGGCTG GTCTCCAACC TGGTCTCCTG GGCTCAAGCG ATCCGCCCGC 000080
000081 CTCGGCCTCC CACAGTGCTG GGATTCCAGG CGTGAGCTAC CGCGCCCGGC CTATTTACTT TTCTTACTAA GCTGGGGATC 000160
000161 ACCGTCGCCC TCGGCTTGGC AGGAAGGCGG GGGTGCAAGA AGAAAAGAGG TACAGAACAC CCAGAGGTGC CCTCGATTCC 000240
000241 GTCTTGCACT TGCCCTTCTC CCACCGTCCA GCAATAAAGC GAGAGAAACA AGTGCAGGAA ACTGGCCGGC AGTCATGGGA 000320
000321 GAAGCCAAAA AGACAGGAGT TCAGTGGCAT GACCAGGGCT CACTGCAACC TTGATCTGGG CTCAAGTGAT CCTCCTACCT 000400
000401 CAGCTTCCTG AGTAGCTAGG ACCACAGGTG TGCACCAACC ACACCCGACT AATTTTTGTA GAGATGAGAT CCCACTATGT 000480
000481 TACCCAGGCT GGTCTTGAAC TCCTGGGCTC AGGTGATCAT CCTGCCTTGG CTTCCCAAAG TACTGGGATT ATAGGCTTGA 000560
000561 GCCACCGTGC CTGGCCTGTG ATCAGAATTC TCATTTTTTT AGTCACTAAA AATGCTGGGG GGCACTCCAT TCTCCATTAT 000640
000641 GTGATTAGTT CACATTGCAT GCTTGTATCA AAACATCATA TATACCCCAC AAATATATAC AAAAAACTTT AAAATTTTAA 000720
000721 GTATTAATTG CTCAGGAAAA AATTAAAATG CTGGGGTGCT GAAATCTCAA GGGCCCCATT ACAAAACTCC TTAGGAACCT 000800
000801 CGCCCTCTCT CTGCTGTAAG GACTGGTTCC AGAATGAGAG AATTTAAAAG ACATTCCCCC CCCAAAATGT TCATAATGTC 000880
000881 ACCCCGGAAA CCTGCGAATA TGTTATATTA CATGACCAGG GAGAAGTAAG GTTGCAGATG GCAGTAAGGT TGCTAATGGG 000960
000961 CTGACCTTAA GATAAGGAGA TGATCCTGGA TTATCTGGGT GGACCCAATG TAATCACAAG GGTCCTTAAC TGTGGAATAG 001040
001041 TGAGGTGGCT GAGTCAGAGG CAGAGTGATG CAATGACTGA AAGACTTAAC CAGCCATCAC CGGCTTTGAA TACGGAAGAC 001120
001121 GGTCATGAGC CAGGGAATGC AGGCAGGCTC TGGGAGCTGA AAAAAGCAAG AAAATGGATT CTCCCCTGGA GCCTCCAGAA 001200
001201 GGGATGCGGT CCTGCCAACC CCTTGTCAGT GAGCCATTTC AGATTTCTGA CTTCCAGGAC TGTAAGAAAA TAAACTTGTC 001280
001281 TTGTTTTCAG CCACCAA
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Predicted Small Protein

Name ENST00000473970.2_smProtein_833:928
Length 32
Molecular weight 3902.7036
Aromaticity 0.129032258065
Instability index 96.9516129032
Isoelectric point 10.6204223633
Runs 5
Runs residual 0.0399865591398
Runs probability 0.0472354707648
Amino acid sequence MREFKRHSPPKMFIMSPRKPANMLYYMTREK
Secondary structure LLLLLLLLLLLLEEELLLLHHHHHHHHHLLL
PRMN -
PiMo -