ENST00000468381.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000468381.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
sense |
Length |
2306 nt |
Genomic location |
chr17-:21435876..21477781 |
Exon number |
4 |
Exons |
21435876..21437282,21438689..21438799,21476490..21476999,21477504..21477781 |
Genome context |
|
Sequence |
000001 AATGCGCATG CGCGAGGAGC GAGCCGCTTC TCCCCATCAC AGCGATTCCC AGGGTTGTCA TAGAAACCAC TCCCTGGGGC 000080
000081 TTGGCAAAGC AGGAGCCCTC CGTGGCAGGG CTTCGGTGTC GGGGCTCCGA GGCTCCGGCC TGACTTCTCC ACGGGGTCCA 000160 000161 CAGGAGCGTC TCCGGATGCC AGGACCTGAA ATGGGCCGAC CAGGATGAGG AAACCACAGG CAGAGGCCGG GGAAGCAGCG 000240 000241 CGGCATCCCA TCCTCAGGCC TGCCCGGACG GTGTTCGGGA TCAAGAGGAC CACACTCCAG CCCAGGACAA AAGCCCCACG 000320 000321 GTAGCACATT GTCCGGCAGG AGAGGAGCAG ACCCACGTCC AAGAAGATGG TTGTACCTTT CCACGCCTCT TCTCTGCGAA 000400 000401 ATGAAGCCAC ACCATGACAC AATCTTGAAG AGGAAGCCGG GAATGGGAGA CGGCAACAAT CCCTGTCCCT GGAACGCTGG 000480 000481 CCTCTATGGA CAAGCCACCC GCTTCGCACC CCTCCCCTTA TGCCCGTGGC GGTGGCACGG CGCCGTATCC TGCCTGGGCT 000560 000561 CTGGCCTCTG CTCTGTCCTC CCTCTTCCAC TGTCTCCCCT GTTTCTCAGC GGCCTAGATG CCTCTTGGTC TGGCTGAATA 000640 000641 TCTTCTATGA AGATCACTTC CCCGTCCATC AGGGAGACAA TTCCTGGAGA TTCGTGTCAT GACTGTTTCT CTCTCCAAAC 000720 000721 CTGTTTCTGC TGGATTGCGC AGGTCTGATG ACCCTGGAGC TCTTGGCTTC CATACGTGTC TCAGACAGAA TCATCTCCCC 000800 000801 TGCCCCACAA ACATGAAAGA AAAGACAAGA GAAGCACCCC AGAAGAGGAG GGGAGAAGTG CCCCAGAAAA AATCATCCAG 000880 000881 TCTCTGAAGC TTTGCCCAGG ATCCATTGCT GCAGCTTCCT GAAGTTGTGT CCGTTAAAAG GCAGGGACCC GGTGTCCAGG 000960 000961 CTACAGAGGG TGACTCCAGG TTCCACACCA CCACTGTGGA CCAGTGTGCC TATGGACTTA GGAGAGTTCC CAGATCGCAC 001040 001041 AAGGGGGCTG CCCCAGAGGG TGTTCAGCTT GTTGCCAACA GTTGCTGAAG CCAAAGTCTG CAACCTTGAT GTTCAGGTCA 001120 001121 AGTAGCCAGA AACAGGTGTT CTGGCTTTAG GTCCCTGTGG ACAATGCCAT TCTCTCCTTC CCAGGCTACT GATGTCCTGG 001200 001201 GTTGCTCCTC TTATGGTAGA AGCTCAAGAT GGAATGGCTG GAGCTTGGCT GCCTCCGGTT AGAGCCTGGG CTCTGTATTG 001280 001281 CAGACATCAC CTGGCAGAAT TCCTCATGGG CCCCTTTTGT CGTGGGTGCG ACTGCTGGGC CAGGGTTGTC GTGGGTAGTA 001360 001361 AAGGTATTTA CCAAGACAAC CGTGAGTAAA GAAAGGCAAA TTTATTACAG AAACTATGAA AATACATTGC AAGAATGCAA 001440 001441 CATGCAGCAC AGCAGAGAAG GGGCTGTCTG CAAAGATAAA GGGCTGGAGG GAAGTTTTCT AAGGTTGTGC TGGACGGCGC 001520 001521 TATGTGCAGG TGAGCTTGTG CTATATGCTA AGAATATGTT GGAATAATTT TAACTGCCAG ACCTTTCCTC TTCTGGTGCC 001600 001601 CGAGGGAAAC GCCCTGCTGC TTTTAGCTGT CTTGTAACCC ACACGCCTTT TCACTTCTGA AGTTGCAAGA ATAACGGCTG 001680 001681 TGGTTTTTCA CACAAAAGGG TTGCAGACTG GGTTAGGTCC CTGTTCCGCC AACCTGGCTG TTTCCCAGTT TCAGTTAACT 001760 001761 TAGTGGTTTA CTAGAGCCCC ACACCTTTCT CTTTCATATG GCCATGATCC AGGAGGTAAT CCGTCACCTC CCCTCCACTA 001840 001841 GAGTGCTCCA TGGCCAGGGA TAATCCGTCA CCTCCCCTCC ACCAGAGTGC TCCATGGCCA GGGGTAATCC TCACCTCTCC 001920 001921 TCCGCTAGAG TGTTCCATGG CCAGGCAGTG TTTCCTGGGT CCAGAGCACC TCAAACAATT TCAGTGTTGT GGTGACTCAG 002000 002001 GGCCTTCACC ATACAGACTT GACAGCATAG TCTAGAGGCT GGAGGGGCTC TGTGACTCCC ATTAATGACA GTCACTGCCA 002080 002081 CGGTTTCCCC AGGCAGGATG TGCCAGGAGA ACTGCTCCAT GTTGGCTCAG CAGAATGTTA TTATAGGTAG CTCAAAAAGA 002160 002161 GAGGGAACAG GGCTTCTCTA GATTATTTCA GGGAACGAGC TATTATTTGA ATGTTAATTT AAGACTATTT TATCAATTAA 002240 002241 AAATGTAAGG CCCAAGAAAC TTCAGTGAGG AAGAATGAAC AAATTGAATA AATACTGTTA AACTTT |
Predicted Small Protein
Name | ENST00000468381.2_smProtein_698:886 |
Length | 63 |
Molecular weight | 6858.8285 |
Aromaticity | 0.0161290322581 |
Instability index | 70.5532258065 |
Isoelectric point | 10.2948608398 |
Runs | 9 |
Runs residual | 0.00847926267281 |
Runs probability | 0.0335335335335 |
Amino acid sequence | MTVSLSKPVSAGLRRSDDPGALGFHTCLRQNHLPCPTNMKEKTREAPQKRRGEVPQKKSS SL |
Secondary structure | LEEELLLLLLLLLEELLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLL LL |
PRMN | - |
PiMo | - |