ENST00000458325.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000458325.1 |
Source |
Gencode19 |
Same with |
lnc-GREM2-6:1,NONHSAT010481 |
Classification |
intronic(AS) |
Length |
950 nt |
Genomic location |
chr1-:239870424..239882419 |
Exon number |
3 |
Exons |
239870424..239871115,239877477..239877564,239882250..239882419 |
Genome context |
|
Sequence |
000001 CTAACTCATA GCCCTGTATT TTGCTAAGTT TTTCCTCTAC TCTTGAGTCC TCCTTTAATC TATAGAGTGT TATTCTACAC 000080
000081 TGGACCTCTC TCTTATTTTT TGGAGTCTAG CATCTTGCAT CTTCCTGGAG CCCCAACTAA ACTCATAACT TCTAAGCTTC 000160 000161 TAAGAAATAT ATGACGAGCT CCATGAGGGC CAAGGCTCTC CATTCTTGTT CACCACTGCA CACTCAGGAG CTCATGGCAT 000240 000241 GCTGGCTGTG CTAGTTCTAG TCAGGGATAA AGTAGGATAA GTGAAGGTAT TTAATTATTG TTTTCTTTTC CAGATCCTCA 000320 000321 ACAGAATAAT TGCTGACAAA CTCTCTTGCC CAGAAAATGT CTACTGGAAT TATGGAGTAC AAAAAAACTA CAAAAGCAAT 000400 000401 GAAAAAAAGA AGGATGTTTT ATTTACATCC TATTTCAAAA CCATTGCTTT CTTGCTATTG TATGTCTCTG CAGGCCCAAT 000480 000481 ATCGCGCATC TTCATAAGAA GTTTAGAATT GTTCCTTATG TTTCCTTCTA ACAAACACTG GTATATTCAC ATGAAAGTGT 000560 000561 ATATTTTATT CACTTCCAAA ACAGTTAGCT CATAATTCAG AACATTGAGG TTTGCAAAAT GACTGAAGGA AACTTTACCT 000640 000641 AAACAATAGT TGCCAGTTCT GCTGAGAATT ATCACGGGCC CACAACGGCT GTGTGTTTTT CCATACAGAT ATTCTAATTT 000720 000721 TTTTATTATG CAGCTAATTT TTTTTTAGAC TCGCGAATAA AATAGCAAGT CAGTCTGTGC ATAAGCATAT GTTTAAATCT 000800 000801 ACCAGGAGAA ATGTCTGGAA TCTTTTTGGT TATTAAAATT AAAATTCAGG ATAATGAAAG GCATATGCAA CTTATTATAT 000880 000881 TCTTTATATA ACTTATTTCA TCTAATCCTC CAAATAGCTA TATAACATAT TTATCCCCAC CTTACATAGA |
Predicted Small Protein
Name | ENST00000458325.1_smProtein_356:496 |
Length | 47 |
Molecular weight | 5409.4868 |
Aromaticity | 0.108695652174 |
Instability index | 69.6893478261 |
Isoelectric point | 10.0247192383 |
Runs | 6 |
Runs residual | 0.0309265010352 |
Runs probability | 0.0199316964023 |
Amino acid sequence | MSTGIMEYKKTTKAMKKRRMFYLHPISKPLLSCYCMSLQAQYRASS |
Secondary structure | LLLLHHHHHHHHHHHHHHHHEEELLLLLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |