ENST00000457901.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000457901.1 |
Source |
Gencode19 |
Same with |
lnc-AC010872.2.1-4:2,NONHSAT069487 |
Classification |
intergenic |
Length |
504 nt |
Genomic location |
chr2+:21444057..21486958 |
Exon number |
2 |
Exons |
21444057..21444166,21486565..21486958 |
Genome context |
|
Sequence |
000001 CAGCACAGCT ATGTGGGAAG AACACAGGCT GGTCTGCAGG TGTCTAGATT TGGATCCTAG CTCTGTTACT TACTACTTTG 000080
000081 TGACTTTGAG CAAATTCACG TCTCTGAAAG ACCAGGACCA GAGACCATGC TGGGAAGCCT GGCTGCTCTT TGAGGACTGA 000160 000161 GATGAACTTA GCAATGCAGA GAAGAACAAA GAGAGGCTTG TGCTCACCGT GTTCCAGAGG GATCACCGTG TTCCCTTTGT 000240 000241 TCATTTGAGG ACATGAATAC AACTATGGTC TTTGGACAAA AGGCATATGC CAGGCAGTAT GAATGGTCTC TCTTGTCTGT 000320 000321 GCAATTAGTA TGTAAGAGCA CGTGAACTGG TGCCTGGGAC CTCTACCTGT TTTAGTATGA TAGCACCACA GTAAAGGGCC 000400 000401 TGGACTTTGT ATGAGCTTGG GAAAATCATG TCACCTCTGC AAGTCTTGGT TTCCCTGGGT GTTAAATGTC AATTTAAGTA 000480 000481 AAATGCTATC TACTTTGTTT TGGA |
Predicted Small Protein
Name | ENST00000457901.1_smProtein_161:247 |
Length | 29 |
Molecular weight | 3196.8799 |
Aromaticity | 0.0714285714286 |
Instability index | 56.7107142857 |
Isoelectric point | 11.542175293 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0319378201731 |
Amino acid sequence | MNLAMQRRTKRGLCSPCSRGITVFPLFI |
Secondary structure | LLHHHHHHHHLLLLLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |