ENST00000457548.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000457548.1

Source

Gencode19

Same with

lnc-SNX27-2:1,NONHSAT006409

Classification

antisense

Length

386 nt

Genomic location

chr1+:151673502..151680862

Exon number

2

Exons

151673502..151673614,151680590..151680862

Genome context

Sequence
000001 CTCTTGGCTT CTTGGGAGAA CAAATTGTAG GAGAGCAGGA AAAGAAACAT GGAGACAGAT GAGAGCAATG TGACGTGGAC 000080
000081 AGTGTTGATG GCTGTGGAGA TGCAGAGACA TGAGATGTGC AAGAGGCTAG AAGAAAAAAT GAGGAATGTG AAGGCACATG 000160
000161 CTTGGAAAGT GAAAAGCCTA CTGGAATGAA AAGGGCATCA TTGGCTACTC TGTGAGGACT CTGAACTGGA AATCATCCCC 000240
000241 ACCCTGGGTT GCCACAGCAA ATGTTTAATC TCAGGCTAGT CTTCCCTTGT AGCTGCCCTG CGTGCCTTAC CACGACTCCT 000320
000321 GCCCCCACAC CCCAGTCCTC ATGGTGTGCC TCAAATCTTA ATACTAGTCT GAGCTGAATA AAAACC
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Predicted Small Protein

Name ENST00000457548.1_smProtein_260:376
Length 39
Molecular weight 4060.6751
Aromaticity 0.0789473684211
Instability index 82.8394736842
Isoelectric point 7.66644287109
Runs 5
Runs residual 0.0410318559557
Runs probability 0.0241123476418
Amino acid sequence MFNLRLVFPCSCPACLTTTPAPTPQSSWCASNLNTSLS
Secondary structure LEEEEEELLLLLLLLLLLLLLLLLLLLHHHLLLLLLLL
PRMN -
PiMo -