ENST00000457273.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000457273.1

Source

Gencode19

Same with

lnc-TTLL7-2:5

Classification

intergenic

Length

1991 nt

Genomic location

chr1-:84267199..84326229

Exon number

3

Exons

84267199..84268934,84315590..84315705,84326091..84326229

Genome context

Sequence
000001 ACCGTTGCTC AGAGTCCAGG CCGGTTAGGA CCAGAGCCTA CCCCGGGTGG CATGGTGATG ATCCAGATTC AGGAGACATG 000080
000081 TCTGAGAAAG GATCGTTCAG ACTTTTTGAC CTATTTTACA TGAGGAATAA AGGATAGAGA ATCTTCTTCC CTTCTGGTCT 000160
000161 GACTAGGAAA GCCAGAGGGA GATGGTGAAG GAGACACAGA GAGAGTAAAA GAACAGACCA TGCCCAGCCT CTCCACTGCA 000240
000241 GGAGCTTGGA ATCAGGACTG TGAGCTTCAT GGAGACAAGA AACTGTGCTT TTTTTCTCCT TCCTGTGAAT GAATCCCATT 000320
000321 GCAGCTTTGA TTGTGGTTGA ATCACCTATG GAAGCCATGC ATCTTCAGCA TGTAGCACAT AATGGACACT CAGCAAATGA 000400
000401 CAACTGAATG AGCAAACTAA TTACTCTGAC CTTGAGCAGT GACTTGTGTG ACCTCTGGCA ATTGGTTCAC CATCTGAATC 000480
000481 CCTCAGCTAG ATACCTCCCT CTAATGCTGC TCCTCCATCG ACAGGCATTC CTCAGCGGTC AGTTGTTTCC CAGCCAGAGC 000560
000561 CCGCACTGGC ACTGATGTCT GCTATTATCA CTGGAGAGGC CCCGGGACTT CACTTGATGC TATCCCACTG GGATGACTGA 000640
000641 GAAGAAGTAG GAGAAAATCA AGCAAAAGCG TGGGCTCGTC TAAGTGTTTC CTCATCTGTT TCTTGGTATC TTCCTTGCTT 000720
000721 CCCTGCTTCT CCCAGCCCCA GACTTCCTTG TCTTCTCTCT TCCATCCAGA AAGACACACA TGCCCCTTCT AAGTATCACT 000800
000801 TTAGGGCTGA AGTCCAAAGT CTTCTCTTAG CTGAAATTCA CTGTGCACTT GCCACTTGGC AGAGACTGCA AACAGCTCAG 000880
000881 TGCGTGTTTT CATAGTCAGC ATTAAAATAA TAATTGCCAC AACACTATTA AAGTTTTCCT CATTGTTGTA ACTGTTGGCA 000960
000961 AAGGCAAATG TCTGGGGAGA TTGACTCCCT GGAAAGCTTC ATTATGCTGC GAGAATATTT TTGATAAAAT TTCAGCAGTT 001040
001041 CCTGACTGTC AACTTCACTA TGTGGTTTTT TTTAAAGTTG TCCCCCACCC CTCTCTAACA GGTCCTCCAA TTCACAAAAA 001120
001121 CATTCAGGTC AGTTGTTGAG TAACTGAATC TTTCCAAGTA ATTAACAGGT AGAATTACCA GGTAGCAGGC AGTGTTTGCT 001200
001201 TGTAATCCGT CAATAGTAGT TGCAGTGGGG CTAATTGTCA TCTTGAGTGG CCCTGCAACC ACATCTAATT AAAAGTGTCA 001280
001281 ACAGAGAGTT ATTTCTGTCT TTTGTTCCCA CTGCTAGGTT GTACGTGTTT ACTTCAGAAA TCCAGGCTCA AAGTAAGACA 001360
001361 GATATTTGGA ACATGTGAAT ATACAGGAAA AACATTCCCC AGCAACTCAA AGTACGTAAA AGCATTTAGG CCTCATTCCT 001440
001441 CTGTCCACCT GACTTTTTTG GTTTGTATTA GTTTATATAT TCAAGGCAGA TATACAGTAT CTGATAAATG CAAGAGGGAC 001520
001521 ATGATGCCTT TTCCTAAGCA GCAAAGTTAT ACTTTGCCAA CTTGACTGGG AGCTGGGCTG AAGGGACAAA GGCAGGAGTC 001600
001601 TTTTAAGACT CACTAACACT TACCTAGTAA TGGCAGTGGC TGCCACTACA GCTAGGTTTC TTGCCTTTGA TTCATATTCT 001680
001681 TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCATG CTTCACTGAA 001760
001761 CTGTTTTCCA GTTCAAGGTA GGTAGATCTG CCAAAACTAA AAAGCCTAGA TTGCATATAG AACATGCCTG GATTTACAGA 001840
001841 GCAAGGATGC AGGAACATAT TTTTCCATCA GCAGAGTCTG GGTCTTGGCT AACTTAAAGT TTTGTGACTG TTCTTGGGAT 001920
001921 CAGCCCTGGG TGAAGCCTCT GTGAGGTCCA GCTGACTACT TCATTCTCAT AAATACTTTC TTTGAAATCT C
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Predicted Small Protein

Name ENST00000457273.1_smProtein_407:574
Length 56
Molecular weight 6392.437
Aromaticity 0.0909090909091
Instability index 66.4490909091
Isoelectric point 8.05181884766
Runs 7
Runs residual 0.0242424242424
Runs probability 0.0390264213794
Amino acid sequence MSKLITLTLSSDLCDLWQLVHHLNPSARYLPLMLLLHRQAFLSGQLFPSQSPHWH
Secondary structure LLLEEEEELLLLHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PRMN -
PiMo -