ENST00000456120.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000456120.1

Source

Gencode19

Same with

lnc-FGFR2-4:2

Classification

intergenic

Length

2014 nt

Genomic location

chr10-:122521324..122536396

Exon number

2

Exons

122521324..122523187,122536247..122536396

Genome context

Sequence
000001 AGGAAGTTAT TGTCCCAAAG TTGTGTGTCA TGCCCGAAGT GTCTGGGATC CCCGAGTGCC TGTGGTGCCC AAGAGCTATG 000080
000081 AATCTGCTAT CATCAACACA GAGGGTACCT TCTGAATGGG CTATGTCTAC AGTGATGCTG CAAATGGAAG CTAACCCTAG 000160
000161 GATGACTGGC CTCTGACACT TGAGCCATCC CATCATCTGT CATGGGTTGA CCCATCCATC CCCTCAATGA GCCTGACCTT 000240
000241 CAGGACCACT GACAGAGGAG CAGTCAATAG AAATTAATTG TTAAATACCC AGAAAATCTG AAATGGTATT TAATATGCAG 000320
000321 TTCATCAAGA GCAAAAGTTC CTTAAATCTT CATCTAGAAA AGTTATTTAT AAGGGATGAA TATGTTGTAT GAATATGTTG 000400
000401 TATGCAAATA TTATATTCAA GGGCAAGACC ATGAAAACAG TTTAAGAATC CGACAGGGAA TTAGATAAAG ACATCGGAGT 000480
000481 GCACTTGTCA AAATACAGCT ATCAAGAATG ATGATGTTGA AAAATAGTTT AGCAATATAA TTGTCTAGAA CCACAGGGAG 000560
000561 TCTGAGATTT TACCCAACTT GTGAGTTAAC AACTCTGCTA TAGCTTCATG AAAGAAGACA CAAGACTCCT GGGTCAGGAA 000640
000641 CAAAGGTCTC TAATACTCAC AGCAATATCA GGAGCCAGAA TTTCAGGATC CTTTTTCCTG CCAGTTTCTC AAGTCCTAAT 000720
000721 TACCACCGAG TTACAGGAAA GGGCCAGGTA ACACTAGCAC TGCCATCAGT GGCTGTATTA CAGAACAGGA ACTCCAAGCT 000800
000801 TAGGAAACCC AAATCTTTTA TAGTTAACAA TGAACACATC TGCCATTGTT CTGAAGGGAG ACGCTACCCC AATCTTCCAC 000880
000881 ACCTGTTCAC TATATAAATA TCTGTGAAAA GATAGACAGA AAAATAGGTG GAGAATGCCT CTGCTCACAA GATGTGCAGA 000960
000961 AACGTGAGAG GCTCATGGAG AACTGTTTCC CTACAATGAC AAAATGCTGA CGATATATTG TTATGTAAAA TAAAGCAGGC 001040
001041 ATTTTTCACC TCATTTTCAT GAAATATAGT GTGTTTATAT AGATATTTAG AAAAGTATGA AAGGACATTC ATCCAGATAT 001120
001121 CAATAGAAGA GTTTATTATT TTTGCTAGTT GTAAGTTCAA ACTTTTCTAG TAAAAATAGA TTACTTGTGA AATTATTTTT 001200
001201 AATCTTTTTT TTTTTTTGAG ATGGAGTCTT GCTCTGTCGC CCAGGCTCGA GTGCAGTGGC ATGATCTCAG CTCACTGCAA 001280
001281 CATCCACCTC CTGGGTTCAA GCAATTCTCC TGCCTCAGCC TCCTGAGTAG CTGGGATTAT AGGTGCATGC CACCATGCCC 001360
001361 AGCTAATTTT TGTATTTTTA GTAGAGACGG GATTTCACCA TGTTGGTCAG GCTGGTCTCG AACTCCTGAC CTCGTGATCT 001440
001441 GCCCACCTCG GCCTCCCAAA GTGCTAGAAT TACAGGTGTG AGCCACTGCA CCCCTCCTAA ATGTCAATTT AATAACTGAG 001520
001521 GGAGCCCTTA AAATACCCCG CTGACTTCCA CACGGGTGTG TAAAATAGAA TCTGCTCACG TCTTAGAGGA GATAAGTACA 001600
001601 TGCTTAATGT TCTTAGGAGA GACCTGCCTT TTGACATGGA AGCTGTGGTA TTGTTGACAA GAGCATACCT CCTTAAACCA 001680
001681 TGCAAACCAC GTTCACATCA AAGCTGCCTA CGAATGATTA TTTTCCATGA TGCTATGCTC CCTCCTGCCT GCCTCAGTGG 001760
001761 CAAGTGTGAC TCAGCAAGTG TATCCAGGGC ATCCCTCACT CTTACTTATT TTTGCCAAAT GCAGTGGAAA TGTATAGACT 001840
001841 TTTTTTCATA TTTATGTTGG CTGCAGAGCA TAAATCTGAA TAGGTTCTCC AAAGTAAGCT TTTTCTGCAT GCATTTGCTC 001920
001921 CCAATGATGA TAGGTATTAT GAATTGCTTT ATAGTAATCA TTATCCTTTT CCATATGTTT TACGGTTAGT CTGTGCTATA 002000
002001 AACTTGTTTG ATTT
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Predicted Small Protein

Name ENST00000456120.1_smProtein_1220:1480
Length 87
Molecular weight 9720.1836
Aromaticity 0.104651162791
Instability index 69.3081395349
Isoelectric point 7.57269287109
Runs 14
Runs residual 0.0231690385283
Runs probability 0.0479092537916
Amino acid sequence MESCSVAQARVQWHDLSSLQHPPPGFKQFSCLSLLSSWDYRCMPPCPANFCIFSRDGISP
CWSGWSRTPDLVICPPRPPKVLELQV
Secondary structure LLLHHHHHHEEEELLLLLLLLLLLLLLEEEEEEELLLLLEELLLLLLLLEEEELLLLLLL
LLLLLLLLLLEEEELLLLLLEEEEEL
PRMN -
PiMo -