ENST00000454626.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000454626.1

Source

Gencode19

Same with

lnc-ZHX3-1:1

Classification

antisense

Length

1462 nt

Genomic location

chr20-:39726969..39766643

Exon number

7

Exons

39726969..39727464,39729298..39729432,39729812..39729929,39762127..39762285,39763779..39763932,39764342..39764451,39766354..39766643

Genome context

Sequence
000001 AGCGGGGGCG GGGCCCGGAG GGAGTCTGGG AGGGCCCGAA AGTTTGCCCA AGTCGCTGGG GCGGCCGGCC GGGGTGCAAG 000080
000081 CAGTCGGGCC GGGCTCCCAC GACCCCCGCG CGGGGCGGGC CCAGGCAGGA AGTGGGCGCA CTTACTGGCC CCCTCGATCT 000160
000161 TGTCGGCGCC CCGGCTCCAC GTGATCTGGC GCGTCTCCAG CTTGACCTGG AAGGTCTTCC GCTCGGGTCG CTGCGACTTC 000240
000241 TTGGAGTAGA ACAAAGTCAT GACGGTGCCC ACCTCGAGGC TGCGGCAGAG CACCGCCAAA ATTGAGGACA CCCACGGTCG 000320
000321 CGGTGGAGCC TGTCTGACAT GTTGAGCCAG GCAGTGGGTC GGCTGCCAGG CACAGCAGGA CAACTTACTG CATTTCAGAG 000400
000401 GAATGATGGT CCACAATTTA CTGATGAGGA AACAGAGATT CAGAGAAGTT CTACAATTTG CCCCAAAGCC ACATAACATG 000480
000481 ACTAGGTGGG AACTAGAACC CAAGTCGGCC TGACTCCATG AGTTTTCTGC CTCACAGGAG ATCCACTGGC TTAGAGTTTC 000560
000561 TCTCTCGTCG CCCAGGCTGG CGTGCAATGG CACAATCTTG GCTCACTGCA ATCTCCGCCT CCCGAGTTCA AGCAGTCCTG 000640
000641 CCTCAGCCTC CTGAGTCTCT TTTGATTTGG TGCTGTCACA GGTTGGGTTC TTTGGATGTG GACTCTGTGA CAGGAAACCA 000720
000721 GCCAAGTAAC CTTGTTATCA TGCCGGACTT CTTTCCACTT ATGTCCTGGA GGAGGAGAAG GAACCTTGGC ATCTCTGGAA 000800
000801 ATAACAGAGC ACGAGGATAG TGAAATAAGA TGCCCCAAAG TGTGAAAGTG GTGATGTTGG CAATTTGGAT ATGCCATACA 000880
000881 GAAGCTGCAC AGAGTGCTTT AAATGAAAAG GTGGAAATTA TCGACTTAAT AAAAAAAACT GTATGGTGAA GTTGCTAAGA 000960
000961 TCTAAGGCAG CCTGTAGAAG AAAAATGACA TCCCAGCTGG ATACCAGAAA GATCCTTCAG TAATGAGGAT GGCCAAGGCT 001040
001041 GGAAGATGGA GATGGATGAG CATCACAAGA TTCCAGAGTA AAATAGATCA AAGAGCAGGG AGGTACATGG CCAATATGAT 001120
001121 TTCATCTGTC TTAAATCCTT AATATCCAGT AGCCACTGTG GGACAGGTCT GCCCATCCTT AATTACTATA TTATTGGCTG 001200
001201 GAGTTACTGA CTGGTTTTTA GGTCACTGAA GCACCAAGAT TCCTGTACAG AGCTACTGAG CAAAGTACTT GTTCACAATT 001280
001281 TTCAGTCTAA CTAAAACCTT TAAGAAAATT TAGACTTTGA GAACTCTAAG TCTTTAGCAT AGAATGATGT GAAATTACTG 001360
001361 ATGTTAATGT TGTGTCATAA GAACCAAGAA GAAAGTTAAA TGAACCAATC ACAATTCCAG AATTCTCCAG AGGTTTAATA 001440
001441 AATTCTGTAG TACCAGTTTC TC
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Predicted Small Protein

Name ENST00000454626.1_smProtein_338:475
Length 46
Molecular weight 4852.3333
Aromaticity 0.0444444444444
Instability index 54.04
Isoelectric point 4.93572998047
Runs 9
Runs residual 0.0377525252525
Runs probability 0.0483228326366
Amino acid sequence MLSQAVGRLPGTAGQLTAFQRNDGPQFTDEETEIQRSSTICPKAT
Secondary structure LHHHHLLLLLLLHHHLLLLLLLLLLLLLLLLLEEEEELLELLLLL
PRMN -
PiMo -