ENST00000454596.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000454596.1 |
Source |
Gencode19 |
Same with |
lnc-ENPP1-1:1,NONHSAT114930 |
Classification |
intergenic |
Length |
2305 nt |
Genomic location |
chr6+:132223103..132241705 |
Exon number |
2 |
Exons |
132223103..132223291,132239590..132241705 |
Genome context |
|
Sequence |
000001 ACAAAGCCTG TTTGGTGGTC TCTTCACACG GACGCGCATG AAATTTGGTG CCATGACTCG GATCGGGGGA CCTCCCTTGG 000080
000081 GAGATCAATC CCCTGTCTTC CTGTTCTTTG CTCCGTGAGA AAGATCCACC TACAACCTCA GGTCCTCAGA CCGACCAGCC 000160 000161 CAAGGAACAT CTCACCAATT TTAAATCAGC TCCAGGAGAA TGGGTGACTT GAACTGGCAA GGAGCAACCT GCTCTCTCCA 000240 000241 CGGGCCTCTG GAACCCCGGC AAGAGAAGAT CCCTTGATCA CCATGGACAC TCAAGTTGGC AAGAAGAGCT CCTTAGAGAA 000320 000321 GTCGTGGGAG GGCAAGCAAG CTGATGTGGA GCCAGGACGA TTTGATGTGG GAGCACCTGC AGTGGAGCAC AGCCAGGGAG 000400 000401 AGCCATCTCC CCAGGCCTGA CTTGCTCCCA TAGGAGACTT TAGCCCTAGG GGAACTGTCC ATCCTGATCT CTGCAGGGTG 000480 000481 GTCTTGTCCA TCAGACAGGG CTGATTCGAC CTGAGCACCC CTTGGTCTGC TGGCCTTTCT GGGGTCCCAG CCTGGCCAGA 000560 000561 CCTGCTTGCA GGGCAGTCTT GGGTGCCCTG GAGGCCACGC CATAGCTTCT GTGCTGGCAG ATAGTATCTG ACTGGTGGAG 000640 000641 AGCTCCAGCA AGGCTGCCCC TAGGCCACAC ACCAGCCCAT CCACCCCCTC CCCACACTGC AGCTTCCCTA GGCCCAGGAA 000720 000721 ACTCCTCACG TGTCTTTGCT GGCACAAGTC TGCACAGGTA GGTTTTGCCT TCCTTGCCCT GCCAGTGCAT GGGAGTGTAG 000800 000801 TCTGCCCCCC TGCCCCGTCT GGCTGTCATT GAAGACAGAG CCTTGGTGGG CACAGAGCAA GCCAGCTCCC CCGCAACGCC 000880 000881 CACCTCAACA CCTGGCCCTT GTGCTAACAC TGTGCAGAGA ACAGTGGACC CTGCTCGCAC CCTGAGTGAT CACTCCTGCT 000960 000961 TGTGGGGCAC AGAGAAGGTG TCCAGACCTG CTCACGCCAG TGCCCTGCCC CCAAGCCAAC ACCACATCCA ACAGGAGCCT 001040 001041 GCACCCAGTC TTCAGCATAG AGGTGAAAGA TCTCTACGAG GAGAACTATG AAACACTGCT CAAAATAATC AAATATGATA 001120 001121 CAAGCAAATG GAAGAGCATG CAATGCTCAT GGATAGGAAG AATCAATATC ATAAAAATGG CCATACTGCC CAAAGCAATT 001200 001201 TATAGATTCA ATGCTATTCC TATTAAACTA CCATTGATAT TCTTCACAAA ACTAGAGAAA ACTATTTTAA AGTTCATATG 001280 001281 GAACCAAAAA AGAGCCTGAA TAGCCAAGGA AATCCTAAGC AAAAAGAACA AAGCTGGAAG CATCATGCTA CCCAACTTCA 001360 001361 AACTATACTA CAGGACTACA GTAACCAAAA CAGCGTGGTA CTGGTACAAA AACAGACACA TAGACCAATG AAACAGAATA 001440 001441 GAGAACCCAG AAATGGTTCT CTATTTCACA CACCTACAAC TATCTGATCT TCGACAAACC TGATAAAAAC AAGCAATAGG 001520 001521 GAAATGATTC TGTATTCATT AAATGATGCT GGAATAACTG GCTAGCCATA TGCTGAAGAT TAAAACTGGA CCCCTTCCTT 001600 001601 ATACTGTACA CAAAAATCAA CTCAAAATGG ATGAAAGACT TAAATGTAAA ACCCAAAACT ATAACAACAA TAGAAGACAA 001680 001681 CCTAGGCAAT ACCATCTTGG ATATAGGAAC AGGCAAAAAT TTCATGACAA AGACACCAAA AGCAATTGAA ACAAAAGCAA 001760 001761 AAATTGAAAA GTGGGTTCTA AATAAAACTA AAGAGCTCCT GCACAGCAAA GAAAATACAA ACAGAGTGAA CAGACAACCT 001840 001841 ACAGAATGAC AGTATCTGCA AACTATACAT CCAACAAAGA TCTAATATTC AGCATCTATA AGAAACTTAA ACAAATTTCC 001920 001921 AAAAACAACC CCATTAAAAA GTGGGCAAAG CATATGAACA GACACTTTTC AAAAGAAGAC ATACATGCAG CCAACAAACA 002000 002001 TGAAAAAGGC TCAACACCAC CAATCATTAG AGAAATGCAA ATCAAAACCA CAATGAGATA CCATCTCACA CTAGTCAGAA 002080 002081 TGGCTGATGG CTGTTATTAA AAAGTCAAAA AATAACAGAT GCTGGCAAGG TTGTGGAGAA AAGGCAATGC TTATGCACTG 002160 002161 TTGGTGGGAG TATAAATTAG TTCAATCATT GTGGTTGACA GTGTGGTGAT TCCTCAAAGA TCTGAAAACA GAAATATAAT 002240 002241 TCTACCTAGC AATGCTACTA CTGGGTATAT ACCCAAAGAA AAATAAATTG TTCAATTATA AAGAC |
Predicted Small Protein
Name | ENST00000454596.1_smProtein_1277:1486 |
Length | 70 |
Molecular weight | 8048.9615 |
Aromaticity | 0.0434782608696 |
Instability index | 47.9884057971 |
Isoelectric point | 10.2109985352 |
Runs | 7 |
Runs residual | 0.0378820490745 |
Runs probability | 0.0427486309839 |
Amino acid sequence | MEPKKSLNSQGNPKQKEQSWKHHATQLQTILQDYSNQNSVVLVQKQTHRPMKQNREPRNG SLFHTPTTI |
Secondary structure | LLLLLLLLLLLLLHHHLLLHHHHHHHHHHHHHHHLLLLEEEEEEELLLLLLLLLLLLLLL LLLLLLLLL |
PRMN | - |
PiMo | - |