ENST00000454066.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000454066.1 |
Source |
Gencode19 |
Same with |
lnc-AC005008.2.1-1:2,NONHSAT121770 |
Classification |
antisense |
Length |
940 nt |
Genomic location |
chr7+:81638508..81657659 |
Exon number |
4 |
Exons |
81638508..81638578,81650126..81650250,81653159..81653213,81656971..81657659 |
Genome context |
|
Sequence |
000001 TGCTGCCTGG CGAAGAGATG CTTTCCGCCA TGATTTTAAG TTTCCTGAGG CCTCCCCAGC CACATGGAAC TATATGACCA 000080
000081 ACATATGTGC TAGAGTGTCT GACGGAGAGA AGAATTTAAT CGATGTCTGT TGAATTCGCT CAAGTAAATA AAACAGAAAA 000160 000161 ACTGTTTTAT AAACGGCAAC AAAGTGCAGT AGTCATGCAA CCACTATTTC ACTCTTCGAA TCTATGAAAT TGACCATTTT 000240 000241 TGATATCTCA TATTGGAGGT TTGTGGCAAC CCTGTATCAA GTAAGTCCAC TGTTGCCATT TTTCCAACAG CACACGCTAA 000320 000321 CTTCATGTCT CTGTCACAGT TTAGTAATTC TTAGAATAGT TTAATCTTTT TCATTATTAT TACATCTGTT ATAGTGATCA 000400 000401 TTATATCTGA TACAGTGAAT ATAGTGATAT CATACTGTTA TATTCAGTGG TCCCTGAAGC TGGCAGAGGT TGGCTCATGA 000480 000481 GGTGTAAGGA AAAAAGGCAT CTCTATAACA TAAAAGTGCA AGGTGAAGCA GCAAGTGCTG ATGTAGAAGC TGCAGCAAGT 000560 000561 TATCCAGAAG ATGTAGCTAA GATCACTGGT GAAGGCCACT ATAATAAACA ACAGATTTTC AATGTAGAGA AAACAGCCTT 000640 000641 GTATTTGAAG ACAATTTTAT CTAGGACTTT CATAGCTAAA AAGGAGAAGT TATTGCCTGC TTCAAAGCTT CAAAGGACAG 000720 000721 GCTGACTTTC TTCTTAGTAG CTAATGCACT TGGTGACTTT AAGTGGAAGC CAGTGCTCTT TTACCATTCC AAAAATCTCA 000800 000801 GGGTCCTTAA GAATTATGCT AAATCTACTC TGCTTATGCT CTGCAAATGA ACCAACAAAG CCTGGATGAC AGCACATCTG 000880 000881 TTTACAGCAT GGTTTACTGA ATATTTTGAG CCCACTATTG AAACATATGT TAAAAAAAAA |
Predicted Small Protein
Name | ENST00000454066.1_smProtein_476:724 |
Length | 83 |
Molecular weight | 9238.5672 |
Aromaticity | 0.0731707317073 |
Instability index | 43.8109756098 |
Isoelectric point | 9.58880615234 |
Runs | 14 |
Runs residual | 0.034830007391 |
Runs probability | 0.0381179498826 |
Amino acid sequence | MRCKEKRHLYNIKVQGEAASADVEAAASYPEDVAKITGEGHYNKQQIFNVEKTALYLKTI LSRTFIAKKEKLLPASKLQRTG |
Secondary structure | LLLLLLLLEELEELLHHHHHHHHHHHHHLLHHHHHHHLLLLLLLLLEEEHHHHHHHHHHH HHHHHHHHHHLLLLHHHHLLLL |
PRMN | - |
PiMo | - |